RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MYH7P12883 1935 aa16.33■□□□□ 0.21
HCFC2-202ENST00000544223 FGAP02671 866 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 APPP05067 770 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 CUL4AQ13619 759 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 ADGRA1Q86SQ6 560 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 SERPINB2P05120 415 aa16.33■□□□□ 0.2
HCFC2-202ENST00000544223 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
HCFC2-202ENST00000544223 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
HCFC2-202ENST00000544223 PRKAB2O43741 272 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
HCFC2-202ENST00000544223 APPBP2Q92624 585 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
HCFC2-202ENST00000544223 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
HCFC2-202ENST00000544223 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 ARMT1Q9H993 441 aa16.32■□□□□ 0.2
HCFC2-202ENST00000544223 RFX7Q2KHR2 1363 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 TCRBV5S4A2TA0A5A2 114 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 MCM2P49736 904 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 Q6ZUG5 572 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
HCFC2-202ENST00000544223 E7EWF7 191 aa16.3■□□□□ 0.2
HCFC2-202ENST00000544223 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
HCFC2-202ENST00000544223 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
HCFC2-202ENST00000544223 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
HCFC2-202ENST00000544223 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
HCFC2-202ENST00000544223 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
HCFC2-202ENST00000544223 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
HCFC2-202ENST00000544223 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.2
HCFC2-202ENST00000544223 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
HCFC2-202ENST00000544223 ARAP2Q8WZ64 1704 aa16.3■□□□□ 0.2
HCFC2-202ENST00000544223 MBD4O95243 580 aa16.29■□□□□ 0.2
HCFC2-202ENST00000544223 BAG4O95429 457 aaKnown RBP16.29■□□□□ 0.2
HCFC2-202ENST00000544223 BRF1Q92994 677 aa16.29■□□□□ 0.2
HCFC2-202ENST00000544223 ZNF512BQ96KM6 892 aaPredicted RBP16.29■□□□□ 0.2
HCFC2-202ENST00000544223 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
HCFC2-202ENST00000544223 PSMA5P28066 241 aa16.29■□□□□ 0.2
HCFC2-202ENST00000544223 LCORLQ8N3X6 602 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
HCFC2-202ENST00000544223 FGD1P98174 961 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 EN1Q05925 392 aaPredicted RBP16.28■□□□□ 0.2
HCFC2-202ENST00000544223 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 ZNF384Q8TF68 577 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 AIDAQ96BJ3 306 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 PDGFDQ9GZP0 370 aaPredicted RBP16.28■□□□□ 0.2
HCFC2-202ENST00000544223 GDPD2Q9HCC8 539 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 RAI14Q9P0K7 980 aa16.28■□□□□ 0.2
HCFC2-202ENST00000544223 ZFYP08048 801 aaPredicted RBP16.27■□□□□ 0.2
HCFC2-202ENST00000544223 GJB2P29033 226 aa16.27■□□□□ 0.2
HCFC2-202ENST00000544223 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
HCFC2-202ENST00000544223 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
HCFC2-202ENST00000544223 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.2
HCFC2-202ENST00000544223 FOSBP53539 338 aa16.27■□□□□ 0.2
HCFC2-202ENST00000544223 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
HCFC2-202ENST00000544223 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.2
HCFC2-202ENST00000544223 TRAK2O60296 914 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 ADRA2BP18089 450 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 CCT2P78371 535 aaKnown RBP16.26■□□□□ 0.19
HCFC2-202ENST00000544223 EVX2Q03828 476 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 EZH2Q15910 746 aaKnown RBP16.26■□□□□ 0.19
HCFC2-202ENST00000544223 SLC4A8Q2Y0W8 1093 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 SDR42E1Q8WUS8 393 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
HCFC2-202ENST00000544223 EPB41L4AQ9HCS5 686 aaPredicted RBP16.26■□□□□ 0.19
HCFC2-202ENST00000544223 ZNF804BA4D1E1 1349 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 JAK2O60674 1132 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 CTDSPL2Q05D32 466 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 UBE4AQ14139 1066 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 TBC1D10CQ8IV04 446 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
HCFC2-202ENST00000544223 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
HCFC2-202ENST00000544223 TACC3Q9Y6A5 838 aa16.26■□□□□ 0.19
HCFC2-202ENST00000544223 DYNLL1P63167 89 aaKnown RBP16.25■□□□□ 0.19
HCFC2-202ENST00000544223 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 SMC3Q9UQE7 1217 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 SYT1P21579 422 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 CYP7A1P22680 504 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 PRDX5P30044 214 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 NUCB2P80303 420 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 GRAPQ13588 217 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
HCFC2-202ENST00000544223 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 INTS4Q96HW7 963 aaKnown RBP16.25■□□□□ 0.19
HCFC2-202ENST00000544223 TCHHQ07283 1943 aa16.25■□□□□ 0.19
HCFC2-202ENST00000544223 ST5P78524 1137 aa16.24■□□□□ 0.19
HCFC2-202ENST00000544223 GPSM2P81274 684 aa16.24■□□□□ 0.19
HCFC2-202ENST00000544223 GSE1Q14687 1217 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms