RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 WWC3Q9ULE0 1092 aa23.7■■□□□ 1.39
COPS7A-218ENST00000543939 MYH13Q9UKX3 1938 aa23.7■■□□□ 1.38
COPS7A-218ENST00000543939 CAMKK2Q96RR4 588 aa23.7■■□□□ 1.38
COPS7A-218ENST00000543939 PDRG1Q9NUG6 133 aa23.7■■□□□ 1.38
COPS7A-218ENST00000543939 ZNF532Q9HCE3 1301 aa23.69■■□□□ 1.38
COPS7A-218ENST00000543939 FOXP2O15409 715 aa23.69■■□□□ 1.38
COPS7A-218ENST00000543939 HOXA10P31260 410 aaPredicted RBP23.69■■□□□ 1.38
COPS7A-218ENST00000543939 MAP3K12Q12852 859 aa23.69■■□□□ 1.38
COPS7A-218ENST00000543939 NOL8Q76FK4 1167 aaKnown RBP23.69■■□□□ 1.38
COPS7A-218ENST00000543939 LAMA4Q16363 1823 aa23.69■■□□□ 1.38
COPS7A-218ENST00000543939 COL1A1P02452 1464 aaPredicted RBP23.68■■□□□ 1.38
COPS7A-218ENST00000543939 GPAA1O43292 621 aa23.68■■□□□ 1.38
COPS7A-218ENST00000543939 KLRK1P26718 216 aa23.68■■□□□ 1.38
COPS7A-218ENST00000543939 RBM17Q96I25 401 aaKnown RBP23.68■■□□□ 1.38
COPS7A-218ENST00000543939 CWC22Q9HCG8 908 aaKnown RBP23.68■■□□□ 1.38
COPS7A-218ENST00000543939 IRS2Q9Y4H2 1338 aa23.68■■□□□ 1.38
COPS7A-218ENST00000543939 IQSEC3Q9UPP2 1182 aaPredicted RBP23.67■■□□□ 1.38
COPS7A-218ENST00000543939 COL9A3Q14050 684 aaPredicted RBP23.67■■□□□ 1.38
COPS7A-218ENST00000543939 EZH2Q15910 746 aaKnown RBP23.67■■□□□ 1.38
COPS7A-218ENST00000543939 BLOC1S2Q6QNY1 142 aa23.67■■□□□ 1.38
COPS7A-218ENST00000543939 VPS37DQ86XT2 251 aa23.67■■□□□ 1.38
COPS7A-218ENST00000543939 ZGPATQ8N5A5 531 aaKnown RBP23.67■■□□□ 1.38
COPS7A-218ENST00000543939 INTS4Q96HW7 963 aaKnown RBP23.67■■□□□ 1.38
COPS7A-218ENST00000543939 LIMCH1Q9UPQ0 1083 aa23.67■■□□□ 1.38
COPS7A-218ENST00000543939 QSER1Q2KHR3 1735 aa23.67■■□□□ 1.38
COPS7A-218ENST00000543939 SEMA3EO15041 775 aa23.66■■□□□ 1.38
COPS7A-218ENST00000543939 ZBTB22O15209 634 aa23.66■■□□□ 1.38
COPS7A-218ENST00000543939 RPS6KB1P23443 525 aa23.66■■□□□ 1.38
COPS7A-218ENST00000543939 CRAMP1Q96RY5 1269 aa23.66■■□□□ 1.38
COPS7A-218ENST00000543939 ALDH8A1Q9H2A2 487 aaPredicted RBP23.66■■□□□ 1.38
COPS7A-218ENST00000543939 DENND2AQ9ULE3 1009 aa23.66■■□□□ 1.38
COPS7A-218ENST00000543939 LEMD3Q9Y2U8 911 aa23.66■■□□□ 1.38
COPS7A-218ENST00000543939 EN1Q05925 392 aaPredicted RBP23.65■■□□□ 1.38
COPS7A-218ENST00000543939 MAGEB6Q8N7X4 407 aa23.65■■□□□ 1.38
COPS7A-218ENST00000543939 PDS5AQ29RF7 1337 aaKnown RBP23.65■■□□□ 1.38
COPS7A-218ENST00000543939 FRAT2O75474 233 aaPredicted RBP23.64■■□□□ 1.38
COPS7A-218ENST00000543939 HIBADHP31937 336 aaKnown RBP23.64■■□□□ 1.38
COPS7A-218ENST00000543939 RAB3GAP1Q15042 981 aa23.64■■□□□ 1.38
COPS7A-218ENST00000543939 SLC51AQ86UW1 340 aa23.64■■□□□ 1.38
COPS7A-218ENST00000543939 NEK1Q96PY6 1258 aa23.64■■□□□ 1.38
COPS7A-218ENST00000543939 BRIP1Q9BX63 1249 aa23.64■■□□□ 1.38
COPS7A-218ENST00000543939 ANO8Q9HCE9 1232 aaPredicted RBP23.64■■□□□ 1.38
COPS7A-218ENST00000543939 CTNNA3Q9UI47 895 aa23.64■■□□□ 1.38
COPS7A-218ENST00000543939 XDHP47989 1333 aa23.64■■□□□ 1.38
COPS7A-218ENST00000543939 BBOX1O75936 387 aa23.64■■□□□ 1.37
COPS7A-218ENST00000543939 STOX1Q6ZVD7 989 aa23.64■■□□□ 1.37
COPS7A-218ENST00000543939 ANKIB1Q9P2G1 1089 aa23.64■■□□□ 1.37
COPS7A-218ENST00000543939 MMP10P09238 476 aa23.63■■□□□ 1.37
COPS7A-218ENST00000543939 SLC15A2Q16348 729 aa23.63■■□□□ 1.37
COPS7A-218ENST00000543939 LRP2BPQ9P2M1 347 aa23.63■■□□□ 1.37
COPS7A-218ENST00000543939 LRRC37AA6NMS7 1700 aa23.63■■□□□ 1.37
COPS7A-218ENST00000543939 A0A0G2JLW4 131 aa23.62■■□□□ 1.37
COPS7A-218ENST00000543939 FGAP02671 866 aa23.62■■□□□ 1.37
COPS7A-218ENST00000543939 TTLL5Q6EMB2 1281 aa23.62■■□□□ 1.37
COPS7A-218ENST00000543939 TXNRD3Q86VQ6 643 aa23.62■■□□□ 1.37
COPS7A-218ENST00000543939 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
COPS7A-218ENST00000543939 CACNA1SQ13698 1873 aa23.62■■□□□ 1.37
COPS7A-218ENST00000543939 C15orf52Q6ZUT6 534 aaKnown RBP23.62■■□□□ 1.37
COPS7A-218ENST00000543939 ZSCAN31Q96LW9 406 aaPredicted RBP23.62■■□□□ 1.37
COPS7A-218ENST00000543939 STRBPQ96SI9 672 aaKnown RBP23.62■■□□□ 1.37
COPS7A-218ENST00000543939 AIDAQ96BJ3 306 aa23.61■■□□□ 1.37
COPS7A-218ENST00000543939 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
COPS7A-218ENST00000543939 GPSM2P81274 684 aa23.6■■□□□ 1.37
COPS7A-218ENST00000543939 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
COPS7A-218ENST00000543939 STK32BQ9NY57 414 aa23.6■■□□□ 1.37
COPS7A-218ENST00000543939 E7EWF7 191 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 HMGB1P09429 215 aaKnown RBP23.59■■□□□ 1.37
COPS7A-218ENST00000543939 NUCB2P80303 420 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 IMMTQ16891 758 aaKnown RBP23.59■■□□□ 1.37
COPS7A-218ENST00000543939 TCEANC2Q96MN5 208 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 SH2B1Q9NRF2 756 aaPredicted RBP23.59■■□□□ 1.37
COPS7A-218ENST00000543939 ABCF2Q9UG63 623 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 COL11A2P13942 1736 aaPredicted RBP23.59■■□□□ 1.37
COPS7A-218ENST00000543939 LTBP1Q14766 1721 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 LARGE1O95461 756 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 TOB2Q14106 344 aaPredicted RBP23.59■■□□□ 1.37
COPS7A-218ENST00000543939 MSL1Q68DK7 614 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 TMC4Q7Z404 712 aa23.59■■□□□ 1.37
COPS7A-218ENST00000543939 TNPO1Q92973 898 aaKnown RBP23.59■■□□□ 1.37
COPS7A-218ENST00000543939 MBD4O95243 580 aa23.58■■□□□ 1.37
COPS7A-218ENST00000543939 SRGNP10124 158 aa23.58■■□□□ 1.37
COPS7A-218ENST00000543939 ATP2B4P23634 1241 aa23.58■■□□□ 1.37
COPS7A-218ENST00000543939 PDE6BP35913 854 aa23.57■■□□□ 1.36
COPS7A-218ENST00000543939 ALX1Q15699 326 aa23.57■■□□□ 1.36
COPS7A-218ENST00000543939 PODXL2Q9NZ53 605 aa23.57■■□□□ 1.36
COPS7A-218ENST00000543939 RAI14Q9P0K7 980 aa23.57■■□□□ 1.36
COPS7A-218ENST00000543939 TPCN1Q9ULQ1 816 aa23.57■■□□□ 1.36
COPS7A-218ENST00000543939 NPR1P16066 1061 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 CYP7A1P22680 504 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 ME3Q16798 604 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 DHX32Q7L7V1 743 aaKnown RBP23.56■■□□□ 1.36
COPS7A-218ENST00000543939 ARMT1Q9H993 441 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 NSFL1CQ9UNZ2 370 aaKnown RBP23.56■■□□□ 1.36
COPS7A-218ENST00000543939 ZMYM6O95789 1325 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 CCDC88AQ3V6T2 1871 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 MAST2Q6P0Q8 1798 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 PATL2C9JE40 543 aaKnown RBP23.56■■□□□ 1.36
COPS7A-218ENST00000543939 EXOSC10Q01780 885 aaKnown RBP23.56■■□□□ 1.36
COPS7A-218ENST00000543939 GGA1Q9UJY5 639 aa23.56■■□□□ 1.36
COPS7A-218ENST00000543939 PPEF1O14829 653 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms