RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ECE2O60344 883 aa14.46□□□□□ -0.09
DDB1-223ENST00000543658 YBX3P16989 372 aaKnown RBP eCLIP14.46□□□□□ -0.093e-9■■□□□ 14.1
DDB1-223ENST00000543658 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
DDB1-223ENST00000543658 TTF1Q15361 905 aaPredicted RBP14.46□□□□□ -0.09
DDB1-223ENST00000543658 DOK7Q18PE1 504 aa14.46□□□□□ -0.09
DDB1-223ENST00000543658 CNTROBQ8N137 903 aa14.46□□□□□ -0.09
DDB1-223ENST00000543658 PI4K2BQ8TCG2 481 aa14.46□□□□□ -0.09
DDB1-223ENST00000543658 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
DDB1-223ENST00000543658 SCN9AQ15858 1988 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 IL1R1P14778 569 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 MCAMP43121 646 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 RASGRF1Q13972 1273 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 PODNQ7Z5L7 613 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 SPATA5Q8NB90 893 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 HAUS7Q99871 368 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 SNRKQ9NRH2 765 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 PAG1Q9NWQ8 432 aa14.45□□□□□ -0.1
DDB1-223ENST00000543658 MAP4K4O95819 1239 aaPredicted RBP14.44□□□□□ -0.1
DDB1-223ENST00000543658 LMNB1P20700 586 aa14.44□□□□□ -0.1
DDB1-223ENST00000543658 ZAP70P43403 619 aa14.44□□□□□ -0.1
DDB1-223ENST00000543658 LRRFIP1Q32MZ4 808 aaKnown RBP14.44□□□□□ -0.1
DDB1-223ENST00000543658 ZGPATQ8N5A5 531 aaKnown RBP14.44□□□□□ -0.1
DDB1-223ENST00000543658 TDRD7Q8NHU6 1098 aaKnown RBP14.44□□□□□ -0.1
DDB1-223ENST00000543658 WDR66Q8TBY9 1149 aa14.44□□□□□ -0.1
DDB1-223ENST00000543658 HMG20BQ9P0W2 317 aa14.44□□□□□ -0.1
DDB1-223ENST00000543658 PDS5AQ29RF7 1337 aaKnown RBP14.43□□□□□ -0.1
DDB1-223ENST00000543658 ZNF646O15015 1829 aaPredicted RBP14.43□□□□□ -0.1
DDB1-223ENST00000543658 MYH2Q9UKX2 1941 aa14.43□□□□□ -0.1
DDB1-223ENST00000543658 GOLIM4O00461 696 aa14.43□□□□□ -0.1
DDB1-223ENST00000543658 BMP2KLQ5H9B9 411 aa14.43□□□□□ -0.1
DDB1-223ENST00000543658 TBC1D22AQ8WUA7 517 aa14.43□□□□□ -0.1
DDB1-223ENST00000543658 EVI5LQ96CN4 794 aa14.43□□□□□ -0.1
DDB1-223ENST00000543658 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
DDB1-223ENST00000543658 EIF6P56537 245 aaKnown RBP14.42□□□□□ -0.1
DDB1-223ENST00000543658 GTF2IP78347 998 aa14.42□□□□□ -0.1
DDB1-223ENST00000543658 SCARF1Q14162 830 aa14.42□□□□□ -0.1
DDB1-223ENST00000543658 SPTY2D1Q68D10 685 aaPredicted RBP14.42□□□□□ -0.1
DDB1-223ENST00000543658 PI16Q6UXB8 463 aa14.42□□□□□ -0.1
DDB1-223ENST00000543658 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.42□□□□□ -0.17e-7■■■■□ 22.1
DDB1-223ENST00000543658 ABCF2Q9UG63 623 aa14.42□□□□□ -0.1
DDB1-223ENST00000543658 ZNRF3Q9ULT6 936 aa14.42□□□□□ -0.1
DDB1-223ENST00000543658 NDUFB9Q9Y6M9 179 aa14.42□□□□□ -0.1
DDB1-223ENST00000543658 COL1A1P02452 1464 aaPredicted RBP14.42□□□□□ -0.1
DDB1-223ENST00000543658 USP17L3A6NCW0 530 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 USP17L4A6NCW7 530 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 ZBTB22O15209 634 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 GSPT1P15170 499 aaKnown RBP14.41□□□□□ -0.1
DDB1-223ENST00000543658 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 ZSCAN25Q6NSZ9 544 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 USP17L1Q7RTZ2 530 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 RNF181Q9P0P0 153 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 LRP2BPQ9P2M1 347 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 JAG2Q9Y219 1238 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
DDB1-223ENST00000543658 COL4A5P29400 1685 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 IDH1O75874 414 aaKnown RBP14.4□□□□□ -0.1
DDB1-223ENST00000543658 MAP3K12Q12852 859 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 ERICH6Q7L0X2 663 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 MYO3BQ8WXR4 1341 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 SALL1Q9NSC2 1324 aa14.4□□□□□ -0.1
DDB1-223ENST00000543658 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 HIP1O00291 1037 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 CYP2E1P05181 493 aaPredicted RBP14.39□□□□□ -0.11
DDB1-223ENST00000543658 LDHBP07195 334 aaKnown RBP14.39□□□□□ -0.11
DDB1-223ENST00000543658 SDSP20132 328 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 TNIP1Q15025 636 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 STRIP1Q5VSL9 837 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 CIAPIN1Q6FI81 312 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 DZIP1Q86YF9 867 aaKnown RBP14.39□□□□□ -0.11
DDB1-223ENST00000543658 KBTBD3Q8NAB2 608 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 EDC3Q96F86 508 aaKnown RBP14.39□□□□□ -0.11
DDB1-223ENST00000543658 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 MAST3O60307 1309 aa14.39□□□□□ -0.11
DDB1-223ENST00000543658 RAD17O75943 681 aa14.38□□□□□ -0.11
DDB1-223ENST00000543658 C9orf131Q5VYM1 1079 aa14.38□□□□□ -0.11
DDB1-223ENST00000543658 ANTXR1Q9H6X2 564 aa14.38□□□□□ -0.11
DDB1-223ENST00000543658 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
DDB1-223ENST00000543658 IGSF3O75054 1194 aa14.37□□□□□ -0.11
DDB1-223ENST00000543658 CDC45O75419 566 aa14.37□□□□□ -0.11
DDB1-223ENST00000543658 ZFYP08048 801 aaPredicted RBP14.37□□□□□ -0.11
DDB1-223ENST00000543658 FKBP1AP62942 108 aaKnown RBP14.37□□□□□ -0.11
DDB1-223ENST00000543658 TBC1D9Q6ZT07 1266 aa14.37□□□□□ -0.11
DDB1-223ENST00000543658 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
DDB1-223ENST00000543658 PIH1D3Q9NQM4 214 aaKnown RBP14.37□□□□□ -0.11
DDB1-223ENST00000543658 SUGT1Q9Y2Z0 365 aa14.37□□□□□ -0.11
DDB1-223ENST00000543658 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 PSMD14O00487 310 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 GSTO1P78417 241 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 RUFY2Q8WXA3 655 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
DDB1-223ENST00000543658 HDAC9Q9UKV0 1011 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 GJA3Q9Y6H8 435 aa14.36□□□□□ -0.11
DDB1-223ENST00000543658 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
DDB1-223ENST00000543658 FZD9O00144 591 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 PRDX5P30044 214 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 PRELPP51888 382 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms