RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
CALU-206ENST00000542996 CSF1RP07333 972 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 G3BP1Q13283 466 aaKnown RBP eCLIP12.59□□□□□ -0.39
CALU-206ENST00000542996 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 FMR1NBQ8N0W7 255 aaPredicted RBP12.59□□□□□ -0.39
CALU-206ENST00000542996 HELBQ8NG08 1087 aaPredicted RBP12.59□□□□□ -0.39
CALU-206ENST00000542996 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 HTTP42858 3142 aa12.59□□□□□ -0.39
CALU-206ENST00000542996 PTPDC1A2A3K4 754 aa12.58□□□□□ -0.39
CALU-206ENST00000542996 CCZ1BP86790 482 aa12.58□□□□□ -0.39
CALU-206ENST00000542996 CCZ1P86791 482 aaPredicted RBP12.58□□□□□ -0.39
CALU-206ENST00000542996 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.39
CALU-206ENST00000542996 GTF2F1P35269 517 aaKnown RBP eCLIP12.58□□□□□ -0.4
CALU-206ENST00000542996 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
CALU-206ENST00000542996 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 CCDC186Q7Z3E2 898 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 DISP2A7MBM2 1401 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 VCANP13611 3396 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 PRKAB2O43741 272 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 IGSF3O75054 1194 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
CALU-206ENST00000542996 PDE4BQ07343 736 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
CALU-206ENST00000542996 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 TFRCP02786 760 aaKnown RBP12.57□□□□□ -0.4
CALU-206ENST00000542996 TOB1P50616 345 aaPredicted RBP12.57□□□□□ -0.4
CALU-206ENST00000542996 TTLL11Q8NHH1 800 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 FBXW7Q969H0 707 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 RCOR1Q9UKL0 485 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 MYRIPQ8NFW9 859 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 CLSTN2Q9H4D0 955 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 ST7Q9NRC1 585 aa12.57□□□□□ -0.4
CALU-206ENST00000542996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.47e-7■■□□□ 12.7
CALU-206ENST00000542996 SBF2Q86WG5 1849 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 ABL1P00519 1130 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 PHKA1P46020 1223 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 ZSCAN25Q6NSZ9 544 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 MYH6P13533 1939 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 A0A087X0B3 334 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 GPTP24298 496 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 HSP90AA2PQ14568 343 aaPredicted RBP12.56□□□□□ -0.4
CALU-206ENST00000542996 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 FMNL2Q96PY5 1086 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 ZNF446Q9NWS9 450 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 XIRP2A4UGR9 3374 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
CALU-206ENST00000542996 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 PHKBQ93100 1093 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 MAP3K14Q99558 947 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 KLRK1P26718 216 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 NCBP1Q09161 790 aaKnown RBP12.55□□□□□ -0.4
CALU-206ENST00000542996 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 EYA2O00167 538 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
CALU-206ENST00000542996 ARMCX5Q6P1M9 558 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 RAPGEF4Q8WZA2 1011 aa12.55□□□□□ -0.4
CALU-206ENST00000542996 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.55□□□□□ -0.4
CALU-206ENST00000542996 CTIFO43310 598 aaKnown RBP12.54□□□□□ -0.4
CALU-206ENST00000542996 PTPAQ15257 358 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 LRRC15Q8TF66 581 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 RREB1Q92766 1687 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 ZNF75DP51815 510 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
CALU-206ENST00000542996 MCCP23508 829 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 TDRD7Q8NHU6 1098 aaKnown RBP12.54□□□□□ -0.4
CALU-206ENST00000542996 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
CALU-206ENST00000542996 CABP4P57796 275 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
CALU-206ENST00000542996 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
CALU-206ENST00000542996 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
CALU-206ENST00000542996 CASP1P29466 404 aa12.53□□□□□ -0.4
CALU-206ENST00000542996 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
CALU-206ENST00000542996 ANKRD7Q92527 254 aa12.53□□□□□ -0.4
CALU-206ENST00000542996 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
CALU-206ENST00000542996 NPY5RQ15761 445 aa12.53□□□□□ -0.4
CALU-206ENST00000542996 E4F1Q66K89 784 aaPredicted RBP12.53□□□□□ -0.4
CALU-206ENST00000542996 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
CALU-206ENST00000542996 TMEM139Q8IV31 216 aa12.53□□□□□ -0.4
CALU-206ENST00000542996 TMEM232C9JQI7 657 aa12.52□□□□□ -0.4
CALU-206ENST00000542996 FGFR2P21802 821 aa12.52□□□□□ -0.4
CALU-206ENST00000542996 NLRP10Q86W26 655 aa12.52□□□□□ -0.4
CALU-206ENST00000542996 SPATA32Q96LK8 384 aa12.52□□□□□ -0.4
CALU-206ENST00000542996 EPC1Q9H2F5 836 aa12.52□□□□□ -0.4
CALU-206ENST00000542996 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.4
CALU-206ENST00000542996 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.4
CALU-206ENST00000542996 BCL9O00512 1426 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms