RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
NECAP1-206ENST00000542095 FOXP2O15409 715 aa12.79□□□□□ -0.36
NECAP1-206ENST00000542095 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
NECAP1-206ENST00000542095 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
NECAP1-206ENST00000542095 FBXL16Q8N461 479 aa12.79□□□□□ -0.36
NECAP1-206ENST00000542095 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
NECAP1-206ENST00000542095 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
NECAP1-206ENST00000542095 CHD4Q14839 1912 aa12.79□□□□□ -0.36
NECAP1-206ENST00000542095 JAK2O60674 1132 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 SMARCC2Q8TAQ2 1214 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
NECAP1-206ENST00000542095 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 ZNF213O14771 459 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
NECAP1-206ENST00000542095 HMGN5P82970 282 aaKnown RBP12.78□□□□□ -0.36
NECAP1-206ENST00000542095 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
NECAP1-206ENST00000542095 RGL2O15211 777 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 PDE6AP16499 860 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 HAND2P61296 217 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 FERMT3Q86UX7 667 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 SPATA5Q8NB90 893 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 NCOA7Q8NI08 942 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 TRIM44Q96DX7 344 aaPredicted RBP12.77□□□□□ -0.36
NECAP1-206ENST00000542095 CDC5LQ99459 802 aaKnown RBP12.77□□□□□ -0.36
NECAP1-206ENST00000542095 TSPY26PQ9H489 355 aa12.77□□□□□ -0.36
NECAP1-206ENST00000542095 ZNF532Q9HCE3 1301 aa12.77□□□□□ -0.37
NECAP1-206ENST00000542095 H3BQV1 296 aa12.77□□□□□ -0.37
NECAP1-206ENST00000542095 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
NECAP1-206ENST00000542095 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
NECAP1-206ENST00000542095 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
NECAP1-206ENST00000542095 PPP1R9BQ96SB3 815 aa12.77□□□□□ -0.37
NECAP1-206ENST00000542095 THSD7AQ9UPZ6 1657 aa12.77□□□□□ -0.37
NECAP1-206ENST00000542095 ELP1O95163 1332 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 MCM5P33992 734 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 CHST3Q7LGC8 479 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 RALYLQ86SE5 291 aaKnown RBP12.76□□□□□ -0.37
NECAP1-206ENST00000542095 DDX11Q96FC9 970 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 NAP1L2Q9ULW6 460 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-206ENST00000542095 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 TCRBV5S4A2TA0A5A2 114 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 PDIA3P30101 505 aaKnown RBP12.76□□□□□ -0.37
NECAP1-206ENST00000542095 EVCP57679 992 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-206ENST00000542095 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-206ENST00000542095 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-206ENST00000542095 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
NECAP1-206ENST00000542095 TAF1P21675 1872 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
NECAP1-206ENST00000542095 CHRNDQ07001 517 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 AIDAQ96BJ3 306 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
NECAP1-206ENST00000542095 PRC1O43663 620 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 APPP05067 770 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 TRDNQ13061 729 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
NECAP1-206ENST00000542095 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 USP21Q9UK80 565 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 RESTQ13127 1097 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 SF3B3Q15393 1217 aaKnown RBP12.74□□□□□ -0.37
NECAP1-206ENST00000542095 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 NAA16Q6N069 864 aaPredicted RBP12.74□□□□□ -0.37
NECAP1-206ENST00000542095 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 SPATA31A6Q5VVP1 1343 aa12.74□□□□□ -0.37
NECAP1-206ENST00000542095 SNAP23O00161 211 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 FAM173BQ6P4H8 233 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 SPATA32Q96LK8 384 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 STRBPQ96SI9 672 aaKnown RBP12.73□□□□□ -0.37
NECAP1-206ENST00000542095 ZMYM6O95789 1325 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 LY75O60449 1722 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 SBF2Q86WG5 1849 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 COL4A1P02462 1669 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 ALX1Q15699 326 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 NCOA5Q9HCD5 579 aaKnown RBP12.73□□□□□ -0.37
NECAP1-206ENST00000542095 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 C4AP0C0L4 1744 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 C4BP0C0L5 1744 aa12.73□□□□□ -0.37
NECAP1-206ENST00000542095 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
NECAP1-206ENST00000542095 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-206ENST00000542095 BCAMP50895 628 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 KCNQ4P56696 695 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 KLF18A0A0U1RQI7 1052 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 GOLGA6L4A6NEF3 574 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
NECAP1-206ENST00000542095 ANTXR2P58335 489 aa12.72□□□□□ -0.37
NECAP1-206ENST00000542095 SLC10A5Q5PT55 438 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms