RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 BICC1Q9H694 974 aaKnown RBP6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 GPCPD1Q9NPB8 672 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 CD2APQ9Y5K6 639 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 LRRFIP2Q9Y608 721 aaKnown RBP6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 UBR3Q6ZT12 1888 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 C10orf71Q711Q0 1435 aa6.23□□□□□ -1.41
SPARCL1-209ENST00000541496 QSER1Q2KHR3 1735 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 FAM177BA6PVY3 158 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 NPHP1O15259 732 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 HOXA10P31260 410 aaPredicted RBP6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 TGFB2P61812 414 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 ATP8B2P98198 1209 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 MDM2Q00987 491 aaPredicted RBP6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 HDAC1Q13547 482 aaPredicted RBP6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 AMHR2Q16671 573 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 CCDC152Q4G0S7 254 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 RTL5Q5HYW3 569 aaPredicted RBP6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 LMBR1LQ6UX01 489 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 SSH3Q8TE77 659 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 JARID2Q92833 1246 aaPredicted RBP6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 PCDHB15Q9Y5E8 787 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 C4AP0C0L4 1744 aa6.22□□□□□ -1.41
SPARCL1-209ENST00000541496 BCORQ6W2J9 1755 aa6.21□□□□□ -1.41
SPARCL1-209ENST00000541496 HMMRO75330 724 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 NR1I2O75469 434 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 SRGNP10124 158 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 NPR1P16066 1061 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 RFX5P48382 616 aaPredicted RBP6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 IRX6P78412 446 aaPredicted RBP6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 GRIPAP1Q4V328 841 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 STYK1Q6J9G0 422 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 SIRT2Q8IXJ6 389 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 CRAMP1Q96RY5 1269 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 CDC5LQ99459 802 aaKnown RBP6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 GREM2Q9H772 168 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 COPRSQ9NQ92 184 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 NOP58Q9Y2X3 529 aaKnown RBP6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 CASZ1Q86V15 1759 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 KAT6BQ8WYB5 2073 aa6.21□□□□□ -1.42
SPARCL1-209ENST00000541496 COL24A1Q17RW2 1714 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 PNMA6EA0A0J9YXQ4 647 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 ANKRD18BA2A2Z9 1011 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 H0YIN7 160 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 SRGAP3O43295 1099 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 BBOX1O75936 387 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 CIAO1O76071 339 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 CD46P15529 392 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 ITGA6P23229 1130 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 GCGRP47871 477 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 PTPN12Q05209 780 aaKnown RBP6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 IFIT5Q13325 482 aaKnown RBP6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 GRAPQ13588 217 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 CCDC57Q2TAC2 916 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 DDX46Q7L014 1031 aaKnown RBP6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 TMC4Q7Z404 712 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 CCDC24Q8N4L8 307 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 GRAPLQ8TC17 118 aaPredicted RBP6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 MASTLQ96GX5 879 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 RBM17Q96I25 401 aaKnown RBP6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 TMUB1Q9BVT8 246 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
SPARCL1-209ENST00000541496 ARFGEF2Q9Y6D5 1785 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 KCNA3P22001 575 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 ALDH1B1P30837 517 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 USP46P62068 366 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 RPS8P62241 208 aaKnown RBP6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 TTLL12Q14166 644 aaPredicted RBP6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 HSP90AB4PQ58FF6 505 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 C2CD5Q86YS7 1000 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 ANKRD18AQ8IVF6 992 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 NLRP7Q8WX94 980 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 RPGRQ92834 1020 aaKnown RBP6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 CNKSR1Q969H4 720 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 RWDD1Q9H446 243 aaPredicted RBP6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 DCTPP1Q9H773 170 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 SEC31BQ9NQW1 1179 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 BSDC1Q9NW68 430 aaPredicted RBP6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 NRXN2Q9P2S2 1712 aa6.19□□□□□ -1.42
SPARCL1-209ENST00000541496 EYA2O00167 538 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 RAB11FIP3O75154 756 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 DPEP1P16444 411 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 CHRNA5P30532 468 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 GGCXP38435 758 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 IGHMBP2P38935 993 aaKnown RBP6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 IL15P40933 162 aaPredicted RBP6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 COPS2P61201 443 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 CC2D2BQ6DHV5 1058 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 BLOC1S3Q6QNY0 202 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 LDHAL6AQ6ZMR3 332 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 SMC5Q8IY18 1101 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 C7orf43Q8WVR3 580 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 CELF1Q92879 486 aaKnown RBP6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 GCC1Q96CN9 775 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 FAM217BQ9NTX9 383 aaPredicted RBP6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 PPP4R2Q9NY27 417 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 CHMP3Q9Y3E7 222 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 RIPOR2Q9Y4F9 1068 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 CACNA1FO60840 1977 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 TUBGCP6Q96RT7 1819 aa6.18□□□□□ -1.42
SPARCL1-209ENST00000541496 TRIM66O15016 1216 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms