RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 CTNNA3Q9UI47 895 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 MRC1P22897 1456 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 CAVIN2O95810 425 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 CCT2P78371 535 aaKnown RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 PTPN12Q05209 780 aaKnown RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 APOBRQ0VD83 1088 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 SNW1Q13573 536 aaKnown RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 SYCP1Q15431 976 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 STX1AQ16623 288 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 SARM1Q6SZW1 724 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 FEZ1Q99689 392 aa12.34□□□□□ -0.43
PHACTR3-209ENST00000541461 PFKFB2O60825 505 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 KRT27Q7Z3Y8 459 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 MRFAP1L1Q96HT8 127 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 COPRSQ9NQ92 184 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 LAMA4Q16363 1823 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 A0A0G2JLW4 131 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 BECN2A8MW95 431 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 SKILP12757 684 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 METTL22Q9BUU2 404 aaPredicted RBP12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
PHACTR3-209ENST00000541461 PTPDC1A2A3K4 754 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 CTAGE5O15320 804 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 UBE3BQ7Z3V4 1068 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 HAUS7Q99871 368 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 LLPHQ9BRT6 129 aaKnown RBP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 ATG3Q9NT62 314 aa12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
PHACTR3-209ENST00000541461 CCZ1BP86790 482 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 CCZ1P86791 482 aaPredicted RBP12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 ATP5J2-PTCD1G3V325 749 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 BCL9O00512 1426 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 KINO60870 393 aaKnown RBP12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 C5P01031 1676 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 ME1P48163 572 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 FAM160A1Q05DH4 1040 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 AOPEPQ8N6M6 819 aa12.31□□□□□ -0.44
PHACTR3-209ENST00000541461 NEMFO60524 1076 aa12.3□□□□□ -0.44
PHACTR3-209ENST00000541461 ANO10Q9NW15 660 aa12.3□□□□□ -0.44
PHACTR3-209ENST00000541461 ZNF215Q9UL58 517 aaPredicted RBP12.3□□□□□ -0.44
PHACTR3-209ENST00000541461 KCNQ4P56696 695 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 FMNL2Q96PY5 1086 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 DDX41Q9UJV9 622 aaKnown RBP12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 GOLIM4O00461 696 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 KIF20AO95235 890 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 CCAR2Q8N163 923 aaKnown RBP12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 KBTBD3Q8NAB2 608 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
PHACTR3-209ENST00000541461 A0A1B0GVL5 298 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 CEP57L1Q8IYX8 460 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 KIF18AQ8NI77 898 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 SLC4A9Q96Q91 983 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 RFX7Q2KHR2 1363 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 SH3TC1Q8TE82 1336 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 A0A087WZG4 1122 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 E7EWF7 191 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 LRP10Q7Z4F1 713 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 NBPF11Q86T75 865 aa12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 FMR1NBQ8N0W7 255 aaPredicted RBP12.28□□□□□ -0.44
PHACTR3-209ENST00000541461 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms