RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 LRRFIP1Q32MZ4 808 aaKnown RBP12.17□□□□□ -0.46
LMO3-224ENST00000540848 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
LMO3-224ENST00000540848 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
LMO3-224ENST00000540848 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
LMO3-224ENST00000540848 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
LMO3-224ENST00000540848 MAP4K1Q92918 833 aa12.17□□□□□ -0.46
LMO3-224ENST00000540848 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
LMO3-224ENST00000540848 IL25Q9H293 177 aa12.17□□□□□ -0.46
LMO3-224ENST00000540848 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
LMO3-224ENST00000540848 SSFA2P28290 1259 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 IL6STP40189 918 aaPredicted RBP12.16□□□□□ -0.46
LMO3-224ENST00000540848 NECTIN1Q15223 517 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 KLHDC4Q8TBB5 520 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 EMID1Q96A84 441 aaPredicted RBP12.16□□□□□ -0.46
LMO3-224ENST00000540848 AK7Q96M32 723 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 TTC14Q96N46 770 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 BOLA2Q9H3K6 86 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
LMO3-224ENST00000540848 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
LMO3-224ENST00000540848 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
LMO3-224ENST00000540848 ZNF609O15014 1411 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 PALLDQ8WX93 1383 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 NMIQ13287 307 aaPredicted RBP12.15□□□□□ -0.46
LMO3-224ENST00000540848 KRT32Q14532 448 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
LMO3-224ENST00000540848 TLR7Q9NYK1 1049 aaKnown RBP12.15□□□□□ -0.46
LMO3-224ENST00000540848 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.15□□□□□ -0.46
LMO3-224ENST00000540848 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
LMO3-224ENST00000540848 TOM1O60784 492 aa12.14□□□□□ -0.47
LMO3-224ENST00000540848 CSF1RP07333 972 aa12.14□□□□□ -0.47
LMO3-224ENST00000540848 KCNJ4P48050 445 aa12.14□□□□□ -0.47
LMO3-224ENST00000540848 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
LMO3-224ENST00000540848 SH3TC1Q8TE82 1336 aa12.14□□□□□ -0.47
LMO3-224ENST00000540848 SLIT2O94813 1529 aa12.14□□□□□ -0.47
LMO3-224ENST00000540848 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 DDB1Q16531 1140 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 GPIHBP1Q8IV16 184 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 RBM8AQ9Y5S9 174 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 MYH3P11055 1940 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 RREB1Q92766 1687 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 SPATA31A5Q5VU36 1347 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 SPATA31A7Q8IWB4 1347 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 WDR33Q9C0J8 1336 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 BRD1O95696 1058 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 CASTP20810 708 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 PTH1RQ03431 593 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
LMO3-224ENST00000540848 DBNDD2Q9BQY9 259 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
LMO3-224ENST00000540848 A0A0D9SFI3 127 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 FSD2A1L4K1 749 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
LMO3-224ENST00000540848 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 Q6ZNB5 142 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 NLRP10Q86W26 655 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 SMARCC1Q92922 1105 aaPredicted RBP12.12□□□□□ -0.47
LMO3-224ENST00000540848 FAM227BQ96M60 508 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 PDRG1Q9NUG6 133 aa12.12□□□□□ -0.47
LMO3-224ENST00000540848 NUP98P52948 1817 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 SLC27A2O14975 620 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 GFRA3O60609 400 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 AK2P54819 239 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 CCDC158Q5M9N0 1113 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
LMO3-224ENST00000540848 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
LMO3-224ENST00000540848 A0A1B0GUL7 405 aa12.1□□□□□ -0.47
LMO3-224ENST00000540848 TAF5LO75529 589 aa12.1□□□□□ -0.47
LMO3-224ENST00000540848 ZFYP08048 801 aaPredicted RBP12.1□□□□□ -0.47
LMO3-224ENST00000540848 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
LMO3-224ENST00000540848 NEUROD6Q96NK8 337 aa12.1□□□□□ -0.47
LMO3-224ENST00000540848 ZNF330Q9Y3S2 320 aaPredicted RBP12.1□□□□□ -0.47
LMO3-224ENST00000540848 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
LMO3-224ENST00000540848 HMGB1P09429 215 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms