RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 FOXP2O15409 715 aa29.42■■■□□ 2.3
TTC3-225ENST00000540756 SRGNP10124 158 aa29.42■■■□□ 2.3
TTC3-225ENST00000540756 NOL8Q76FK4 1167 aaKnown RBP29.42■■■□□ 2.3
TTC3-225ENST00000540756 JAKMIP1Q96N16 626 aaKnown RBP29.42■■■□□ 2.3
TTC3-225ENST00000540756 CRAMP1Q96RY5 1269 aa29.42■■■□□ 2.3
TTC3-225ENST00000540756 CASTP20810 708 aaKnown RBP29.41■■■□□ 2.3
TTC3-225ENST00000540756 GNL3LQ9NVN8 582 aaKnown RBP29.41■■■□□ 2.3
TTC3-225ENST00000540756 NSFL1CQ9UNZ2 370 aaKnown RBP29.41■■■□□ 2.3
TTC3-225ENST00000540756 COL11A2P13942 1736 aaPredicted RBP29.41■■■□□ 2.3
TTC3-225ENST00000540756 MAGEB6Q8N7X4 407 aa29.4■■■□□ 2.3
TTC3-225ENST00000540756 XDHP47989 1333 aa29.4■■■□□ 2.3
TTC3-225ENST00000540756 QSER1Q2KHR3 1735 aa29.4■■■□□ 2.3
TTC3-225ENST00000540756 BBOX1O75936 387 aa29.4■■■□□ 2.3
TTC3-225ENST00000540756 ZKSCAN1P17029 563 aaPredicted RBP29.4■■■□□ 2.3
TTC3-225ENST00000540756 HIBADHP31937 336 aaKnown RBP29.4■■■□□ 2.3
TTC3-225ENST00000540756 UBE3CQ15386 1083 aa29.39■■■□□ 2.3
TTC3-225ENST00000540756 ZSCAN25Q6NSZ9 544 aa29.39■■■□□ 2.3
TTC3-225ENST00000540756 GPAA1O43292 621 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 CYP21A2P08686 494 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 OLFM4Q6UX06 510 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 DSCC1Q9BVC3 393 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 ABCF2Q9UG63 623 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 U3KPZ7 1027 aaPredicted RBP29.38■■■□□ 2.29
TTC3-225ENST00000540756 JAG2Q9Y219 1238 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 MYH13Q9UKX3 1938 aa29.38■■■□□ 2.29
TTC3-225ENST00000540756 MAP3K12Q12852 859 aa29.37■■■□□ 2.29
TTC3-225ENST00000540756 LARP6Q9BRS8 491 aaKnown RBP29.37■■■□□ 2.29
TTC3-225ENST00000540756 LRP2BPQ9P2M1 347 aa29.37■■■□□ 2.29
TTC3-225ENST00000540756 LEMD3Q9Y2U8 911 aa29.37■■■□□ 2.29
TTC3-225ENST00000540756 TTLL5Q6EMB2 1281 aa29.37■■■□□ 2.29
TTC3-225ENST00000540756 TTC14Q96N46 770 aa29.37■■■□□ 2.29
TTC3-225ENST00000540756 FRAT2O75474 233 aaPredicted RBP29.36■■■□□ 2.29
TTC3-225ENST00000540756 RNF20Q5VTR2 975 aa29.36■■■□□ 2.29
TTC3-225ENST00000540756 PDE6BP35913 854 aa29.35■■■□□ 2.29
TTC3-225ENST00000540756 ZSWIM6Q9HCJ5 1215 aa29.35■■■□□ 2.29
TTC3-225ENST00000540756 DENND2AQ9ULE3 1009 aa29.35■■■□□ 2.29
TTC3-225ENST00000540756 RPAP1Q9BWH6 1393 aaPredicted RBP29.35■■■□□ 2.29
TTC3-225ENST00000540756 PPEF1O14829 653 aaPredicted RBP29.35■■■□□ 2.29
TTC3-225ENST00000540756 UFL1O94874 794 aa29.35■■■□□ 2.29
TTC3-225ENST00000540756 NPR1P16066 1061 aa29.35■■■□□ 2.29
TTC3-225ENST00000540756 HSP90AA1P07900 732 aaKnown RBP29.34■■■□□ 2.29
TTC3-225ENST00000540756 POLLQ9UGP5 575 aa29.34■■■□□ 2.29
TTC3-225ENST00000540756 CACNA1SQ13698 1873 aa29.34■■■□□ 2.29
TTC3-225ENST00000540756 ILDR1Q86SU0 546 aaPredicted RBP29.33■■■□□ 2.29
TTC3-225ENST00000540756 TMX3Q96JJ7 454 aa29.33■■■□□ 2.29
TTC3-225ENST00000540756 AK2P54819 239 aa29.33■■■□□ 2.29
TTC3-225ENST00000540756 CHAF1AQ13111 956 aaPredicted RBP29.33■■■□□ 2.29
TTC3-225ENST00000540756 TSGA10IPQ3SY00 556 aa29.33■■■□□ 2.29
TTC3-225ENST00000540756 ADGRA1Q86SQ6 560 aa29.33■■■□□ 2.29
TTC3-225ENST00000540756 TCEANC2Q96MN5 208 aa29.33■■■□□ 2.29
TTC3-225ENST00000540756 TM6SF1Q9BZW5 370 aa29.33■■■□□ 2.29
TTC3-225ENST00000540756 DDIT3P35638 169 aa29.32■■■□□ 2.28
TTC3-225ENST00000540756 STOX1Q6ZVD7 989 aa29.32■■■□□ 2.28
TTC3-225ENST00000540756 GGA1Q9UJY5 639 aa29.32■■■□□ 2.28
TTC3-225ENST00000540756 LRRC37AA6NMS7 1700 aa29.32■■■□□ 2.28
TTC3-225ENST00000540756 RUFY3Q7L099 469 aa29.32■■■□□ 2.28
TTC3-225ENST00000540756 RAI14Q9P0K7 980 aa29.32■■■□□ 2.28
TTC3-225ENST00000540756 FGAP02671 866 aa29.31■■■□□ 2.28
TTC3-225ENST00000540756 TBC1D16Q8TBP0 767 aa29.31■■■□□ 2.28
TTC3-225ENST00000540756 ZNF384Q8TF68 577 aa29.31■■■□□ 2.28
TTC3-225ENST00000540756 ZNF622Q969S3 477 aaKnown RBP eCLIP29.31■■■□□ 2.281e-6■■□□□ 12.9
TTC3-225ENST00000540756 ATP6V0A2Q9Y487 856 aa29.31■■■□□ 2.28
TTC3-225ENST00000540756 CYP46A1Q9Y6A2 500 aa29.31■■■□□ 2.28
TTC3-225ENST00000540756 LTBP1Q14766 1721 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 SEMA3EO15041 775 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 C2CD5Q86YS7 1000 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 SP8Q8IXZ3 490 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 MASTLQ96GX5 879 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 PODXL2Q9NZ53 605 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 CHRNA5P30532 468 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 MIGA1Q8NAN2 632 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 AIDAQ96BJ3 306 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 STRBPQ96SI9 672 aaKnown RBP29.3■■■□□ 2.28
TTC3-225ENST00000540756 PDRG1Q9NUG6 133 aa29.3■■■□□ 2.28
TTC3-225ENST00000540756 MBD4O95243 580 aa29.29■■■□□ 2.28
TTC3-225ENST00000540756 ATP2B4P23634 1241 aa29.29■■■□□ 2.28
TTC3-225ENST00000540756 ZGPATQ8N5A5 531 aaKnown RBP29.29■■■□□ 2.28
TTC3-225ENST00000540756 ARMT1Q9H993 441 aa29.29■■■□□ 2.28
TTC3-225ENST00000540756 MCM2P49736 904 aa29.28■■■□□ 2.28
TTC3-225ENST00000540756 CYP7A1P22680 504 aa29.28■■■□□ 2.28
TTC3-225ENST00000540756 HAND2P61296 217 aa29.28■■■□□ 2.28
TTC3-225ENST00000540756 LAMA4Q16363 1823 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 PSMA5P28066 241 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 ALDH1B1P30837 517 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 C15orf52Q6ZUT6 534 aaKnown RBP29.27■■■□□ 2.28
TTC3-225ENST00000540756 C6orf229H3BNL8 230 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 PRDX5P30044 214 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 BLOC1S2Q6QNY1 142 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 LCORLQ8N3X6 602 aa29.27■■■□□ 2.28
TTC3-225ENST00000540756 TDRD7Q8NHU6 1098 aaKnown RBP29.27■■■□□ 2.28
TTC3-225ENST00000540756 PRKAB2O43741 272 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 RPS6KB1P23443 525 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 NBR1Q14596 966 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 ZNF804AQ7Z570 1209 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 NEK1Q96PY6 1258 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 H0YIN7 160 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 APPP05067 770 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 TMC4Q7Z404 712 aa29.25■■■□□ 2.27
TTC3-225ENST00000540756 PDS5AQ29RF7 1337 aaKnown RBP29.25■■■□□ 2.27
TTC3-225ENST00000540756 SLX4Q8IY92 1834 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms