RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 A0A1B0GUL6 1792 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
LCOR-209ENST00000540664 CCDC152Q4G0S7 254 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
LCOR-209ENST00000540664 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
LCOR-209ENST00000540664 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 BTAF1O14981 1849 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 FIBPO43427 364 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 SLC5A1P13866 664 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
LCOR-209ENST00000540664 RTN4Q9NQC3 1192 aaKnown RBP11.29□□□□□ -0.6
LCOR-209ENST00000540664 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 COL4A1P02462 1669 aa11.29□□□□□ -0.6
LCOR-209ENST00000540664 LETM1O95202 739 aaPredicted RBP11.28□□□□□ -0.6
LCOR-209ENST00000540664 KRT85P78386 507 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 SLC9C2Q5TAH2 1124 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 MEX3CQ5U5Q3 659 aaKnown RBP11.28□□□□□ -0.6
LCOR-209ENST00000540664 PDLIM2Q96JY6 352 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
LCOR-209ENST00000540664 PDE6AP16499 860 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
LCOR-209ENST00000540664 HSPA1LP34931 641 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
LCOR-209ENST00000540664 FGD1P98174 961 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 RESTQ13127 1097 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 TTC6Q86TZ1 520 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 SPATA5Q8NB90 893 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
LCOR-209ENST00000540664 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 MYH15Q9Y2K3 1946 aa11.28□□□□□ -0.6
LCOR-209ENST00000540664 COL24A1Q17RW2 1714 aa11.27□□□□□ -0.6
LCOR-209ENST00000540664 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.61
LCOR-209ENST00000540664 FERMT3Q86UX7 667 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 CHMP4CQ96CF2 233 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 TSPY26PQ9H489 355 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 IGHMBP2P38935 993 aaKnown RBP11.27□□□□□ -0.61
LCOR-209ENST00000540664 ANTXR2P58335 489 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 RASGRF1Q13972 1273 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
LCOR-209ENST00000540664 ALX1Q15699 326 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
LCOR-209ENST00000540664 PTF1AQ7RTS3 328 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 SCAND2PQ9GZW5 306 aaPredicted RBP11.27□□□□□ -0.61
LCOR-209ENST00000540664 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.61
LCOR-209ENST00000540664 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
LCOR-209ENST00000540664 PTPDC1A2A3K4 754 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 ZNF213O14771 459 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 MCM5P33992 734 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 HAND2P61296 217 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 ANP32BQ92688 251 aaKnown RBP11.26□□□□□ -0.61
LCOR-209ENST00000540664 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
LCOR-209ENST00000540664 AFF2P51816 1311 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 TIAM2Q8IVF5 1701 aa11.26□□□□□ -0.61
LCOR-209ENST00000540664 IDH1O75874 414 aaKnown RBP11.25□□□□□ -0.61
LCOR-209ENST00000540664 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 CHST3Q7LGC8 479 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
LCOR-209ENST00000540664 FUCA2Q9BTY2 467 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 SBF2Q86WG5 1849 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 C4AP0C0L4 1744 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 C4BP0C0L5 1744 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 ZNF804BA4D1E1 1349 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 SNAP23O00161 211 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 PRC1O43663 620 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 CHRNDQ07001 517 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 LEO1Q8WVC0 666 aaPredicted RBP11.25□□□□□ -0.61
LCOR-209ENST00000540664 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 LY75O60449 1722 aa11.25□□□□□ -0.61
LCOR-209ENST00000540664 ADD1P35611 737 aaKnown RBP11.24□□□□□ -0.61
LCOR-209ENST00000540664 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
LCOR-209ENST00000540664 NCOA5Q9HCD5 579 aaKnown RBP11.24□□□□□ -0.61
LCOR-209ENST00000540664 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
LCOR-209ENST00000540664 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 FDPSP14324 419 aaKnown RBP11.24□□□□□ -0.61
LCOR-209ENST00000540664 KCNQ4P56696 695 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 CCT2P78371 535 aaKnown RBP11.24□□□□□ -0.61
LCOR-209ENST00000540664 MAP3K12Q12852 859 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 HS1BP3Q53T59 392 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 FAM182BQ5T319 152 aa11.24□□□□□ -0.61
LCOR-209ENST00000540664 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms