RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 JAKMIP3Q5VZ66 844 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 KSR2Q6VAB6 950 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 FBXO18Q8NFZ0 1043 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 NRKQ7Z2Y5 1582 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 ARHGAP6O43182 974 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 DDX58O95786 925 aaKnown RBP14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 PSME1Q06323 249 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 TSGA10IPQ3SY00 556 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 TRIM65Q6PJ69 517 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 DPF2Q92785 391 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 BAG1Q99933 345 aaPredicted RBP14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 EFCC1Q9HA90 598 aa14.8□□□□□ -0.04
SFSWAP-209ENST00000540469 KDRP35968 1356 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 PHACTR2O75167 634 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 EIF3JO75822 258 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 EXOC4Q96A65 974 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 WDR24Q96S15 920 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 USP6P35125 1406 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 ACTN2P35609 894 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 CEP170BQ9Y4F5 1589 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 GOLGA6L9A6NEM1 432 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 SYKP43405 635 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 NEXNQ0ZGT2 675 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 TTLL5Q6EMB2 1281 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 MPRIPQ6WCQ1 1025 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 DESI2Q9BSY9 194 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 PDE11AQ9HCR9 933 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 RTEL1Q9NZ71 1219 aa14.79□□□□□ -0.04
SFSWAP-209ENST00000540469 A0A1W2PQ27 194 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 A0A1W2PQ64 194 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 A0A1W2PQD8 194 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 TMEM232C9JQI7 657 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 CTDNEP1O95476 244 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 HSPA2P54652 639 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 SRLQ86TD4 932 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 LINC00301Q8NCQ3 95 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 NEUROD6Q96NK8 337 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 ERLIN1O75477 346 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 IVLP07476 585 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 PFKFB1P16118 471 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 REXO1L1PQ8IX06 675 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 RABGGTAQ92696 567 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 DHX58Q96C10 678 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 ITSN1Q15811 1721 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 FAM208AQ9UK61 1670 aaKnown RBP14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 PLEKHG3A1L390 1219 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 BPIFA3Q9BQP9 254 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 LZTFL1Q9NQ48 299 aa14.78□□□□□ -0.04
SFSWAP-209ENST00000540469 HOXC9P31274 260 aa14.77□□□□□ -0.04
SFSWAP-209ENST00000540469 ADKP55263 362 aaKnown RBP14.77□□□□□ -0.04
SFSWAP-209ENST00000540469 ZNF530Q6P9A1 599 aaPredicted RBP14.77□□□□□ -0.04
SFSWAP-209ENST00000540469 DHX37Q8IY37 1157 aaKnown RBP14.77□□□□□ -0.04
SFSWAP-209ENST00000540469 VWA3AA6NCI4 1184 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 CHMP4BP1P59074 171 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 EP400NLQ6ZTU2 488 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 STOX1Q6ZVD7 989 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 GPATCH11Q8N954 259 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 LINS1Q8NG48 757 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 CARMIL3Q8ND23 1372 aa14.77□□□□□ -0.05
SFSWAP-209ENST00000540469 TTC31Q49AM3 519 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 FUT8Q9BYC5 575 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 FANCLQ9NW38 375 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 PRR29P0C7W0 189 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 TXLNAP40222 546 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 NCAPHQ15003 741 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 CTR9Q6PD62 1173 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 H3BQF6 201 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 MON2Q7Z3U7 1717 aa14.76□□□□□ -0.05
SFSWAP-209ENST00000540469 C3P01024 1663 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 A2ML1A8K2U0 1454 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 A0A1B0GUL7 405 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 ANKRD65E5RJM6 399 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 GOLIM4O00461 696 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 IKBKBO14920 756 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 LTKP29376 864 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 PNOCQ13519 176 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 VSTM4Q8IW00 320 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 ABTB2Q8N961 1025 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 GJB4Q9NTQ9 266 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 DBNLQ9UJU6 430 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 MRFAP1Q9Y605 127 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 USP31Q70CQ4 1352 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 CCDC151A5D8V7 595 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 YEATS4O95619 227 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 HOXB7P09629 217 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 RHOXF2BP0C7M4 288 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 MYL6BP14649 208 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 TFCP2Q12800 502 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 MYSM1Q5VVJ2 828 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 HDXQ7Z353 690 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 RHOXF2Q9BQY4 288 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 SNRKQ9NRH2 765 aa14.75□□□□□ -0.05
SFSWAP-209ENST00000540469 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms