RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 UBE4AQ14139 1066 aa10.62□□□□□ -0.71
DDB1-213ENST00000539332 HSCBQ8IWL3 235 aa10.62□□□□□ -0.71
DDB1-213ENST00000539332 DNAJC2Q99543 621 aaKnown RBP10.62□□□□□ -0.71
DDB1-213ENST00000539332 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
DDB1-213ENST00000539332 ANKIB1Q9P2G1 1089 aa10.62□□□□□ -0.71
DDB1-213ENST00000539332 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
DDB1-213ENST00000539332 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
DDB1-213ENST00000539332 CHD4Q14839 1912 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 PRPF40BQ6NWY9 871 aaKnown RBP10.61□□□□□ -0.71
DDB1-213ENST00000539332 SP8Q8IXZ3 490 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 CNKSR1Q969H4 720 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 NDUFB9Q9Y6M9 179 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 CCDC88AQ3V6T2 1871 aa10.61□□□□□ -0.71
DDB1-213ENST00000539332 ZNF804BA4D1E1 1349 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 UQCRFS1P1P0C7P4 283 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 PTMSP20962 102 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 MCAMP43121 646 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 KCNJ4P48050 445 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 MRE11P49959 708 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 GPSM2P81274 684 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 PTH1RQ03431 593 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 SCARF1Q14162 830 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 ZMYM1Q5SVZ6 1142 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 CCDC102BQ68D86 513 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
DDB1-213ENST00000539332 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
DDB1-213ENST00000539332 GOLIM4O00461 696 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
DDB1-213ENST00000539332 DPEP1P16444 411 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 KCNA3P22001 575 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 DDIT3P35638 169 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 PHKA1P46020 1223 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 TGFB2P61812 414 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 OLFM4Q6UX06 510 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 KIAA1211Q6ZU35 1233 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
DDB1-213ENST00000539332 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
DDB1-213ENST00000539332 SPON1Q9HCB6 807 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 RRAGDQ9NQL2 400 aaPredicted RBP10.6□□□□□ -0.71
DDB1-213ENST00000539332 HELLSQ9NRZ9 838 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 LEMD3Q9Y2U8 911 aa10.6□□□□□ -0.71
DDB1-213ENST00000539332 DUOX1Q9NRD9 1551 aa10.59□□□□□ -0.71
DDB1-213ENST00000539332 KLRK1P26718 216 aa10.59□□□□□ -0.71
DDB1-213ENST00000539332 BCAMP50895 628 aa10.59□□□□□ -0.71
DDB1-213ENST00000539332 PPP1R1BQ9UD71 204 aaPredicted RBP10.59□□□□□ -0.71
DDB1-213ENST00000539332 CD2APQ9Y5K6 639 aa10.59□□□□□ -0.71
DDB1-213ENST00000539332 SNX14Q9Y5W7 946 aa10.59□□□□□ -0.71
DDB1-213ENST00000539332 RPAP1Q9BWH6 1393 aaPredicted RBP10.58□□□□□ -0.72
DDB1-213ENST00000539332 IRS2Q9Y4H2 1338 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 RNF113AO15541 343 aaKnown RBP10.58□□□□□ -0.72
DDB1-213ENST00000539332 UFL1O94874 794 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 ZFYP08048 801 aaPredicted RBP10.58□□□□□ -0.72
DDB1-213ENST00000539332 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 ZAP70P43403 619 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 GYG1P46976 350 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 MCMDC2Q4G0Z9 681 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 TTLL6Q8N841 843 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.72
DDB1-213ENST00000539332 TM6SF1Q9BZW5 370 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 TMX4Q9H1E5 349 aaPredicted RBP10.58□□□□□ -0.72
DDB1-213ENST00000539332 POLLQ9UGP5 575 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 GGA1Q9UJY5 639 aa10.58□□□□□ -0.72
DDB1-213ENST00000539332 ST18O60284 1047 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 ATP2B4P23634 1241 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 TSGA10IPQ3SY00 556 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 PI16Q6UXB8 463 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 MPNDQ8N594 471 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 PKNOX2Q96KN3 472 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 CHMP5Q9NZZ3 219 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 COL1A1P02452 1464 aaPredicted RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 UTRNP46939 3433 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 CHGBP05060 677 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 CYP2E1P05181 493 aaPredicted RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 MCM4P33991 863 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 FKBP4Q02790 459 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDB1-213ENST00000539332 PDE4CQ08493 712 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 RASGRF1Q13972 1273 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 TTF1Q15361 905 aaPredicted RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 DPP8Q6V1X1 898 aaPredicted RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 C15orf52Q6ZUT6 534 aaKnown RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 FBXO33Q7Z6M2 555 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 GPR101Q96P66 508 aaPredicted RBP10.57□□□□□ -0.72
DDB1-213ENST00000539332 PIM2Q9P1W9 311 aa10.57□□□□□ -0.72
DDB1-213ENST00000539332 MAST3O60307 1309 aa10.56□□□□□ -0.72
DDB1-213ENST00000539332 PDS5AQ29RF7 1337 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms