RNA–Protein interactions for RNA: ENST00000538621.2

PACSIN1-206, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-206ENST00000538621 CPS1P31327 1500 aa12.63□□□□□ -0.39
PACSIN1-206ENST00000538621 A0A087WWV3 80 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 STX17P56962 302 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 GSDMDP57764 484 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 GNG11P61952 73 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 TMCO3Q6UWJ1 677 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 PREX1Q8TCU6 1659 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 TSPY2A6NKD2 308 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 ADAMTS13Q76LX8 1427 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 CCDC43Q96MW1 224 aaKnown RBP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 PHKG2P15735 406 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 KIF2CQ99661 725 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
PACSIN1-206ENST00000538621 RBM5P52756 815 aaKnown RBP eCLIP12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 RTN1Q16799 776 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 ZNF589Q86UQ0 364 aaPredicted RBP12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 PHKBQ93100 1093 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 STAP2Q9UGK3 403 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 ZNF652Q9Y2D9 606 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 ZSCAN12O43309 604 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 LRMPQ12912 555 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 XAGE2Q96GT9 111 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 ACBD3Q9H3P7 528 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 NR1I2O75469 434 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 DDB1Q16531 1140 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
PACSIN1-206ENST00000538621 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 GPAA1O43292 621 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 NEMFO60524 1076 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 TEX13AQ9BXU3 409 aaPredicted RBP12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 ERBB3P21860 1342 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 CAVIN2O95810 425 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 ZAP70P43403 619 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 DHX58Q96C10 678 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 PPP1R9BQ96SB3 815 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 ZPR1O75312 459 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 TAF5LO75529 589 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 MBD4O95243 580 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
PACSIN1-206ENST00000538621 PRDM1O75626 825 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 KCNA4P22459 653 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 ITGA6P23229 1130 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 CASQ1P31415 396 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 KIAA1210Q9ULL0 1709 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 hCG_1642624A0A1W2PR95 340 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 CCDC94Q9BW85 323 aaPredicted RBP12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
PACSIN1-206ENST00000538621 RGS12O14924 1447 aa12.58□□□□□ -0.39
PACSIN1-206ENST00000538621 PPLO60437 1756 aa12.58□□□□□ -0.39
PACSIN1-206ENST00000538621 RIOK3O14730 519 aaKnown RBP12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 IDEP14735 1019 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 SYT10Q6XYQ8 523 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 CDC5LQ99459 802 aaKnown RBP12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 AGLP35573 1532 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 E7EWF7 191 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 KIF5CO60282 957 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 ATP5JP18859 108 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 USP28Q96RU2 1077 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 CCDC181Q5TID7 509 aa12.58□□□□□ -0.4
PACSIN1-206ENST00000538621 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms