RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 LAMB2P55268 1798 aa18.1■□□□□ 0.49
CDH20-203ENST00000538374 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
CDH20-203ENST00000538374 HLFQ16534 295 aa18.1■□□□□ 0.49
CDH20-203ENST00000538374 KIF3AQ9Y496 699 aa18.1■□□□□ 0.49
CDH20-203ENST00000538374 E7EWF7 191 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 M0R2C6 588 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
CDH20-203ENST00000538374 KRT32Q14532 448 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
CDH20-203ENST00000538374 DDX19AQ9NUU7 478 aaKnown RBP18.09■□□□□ 0.49
CDH20-203ENST00000538374 LRP5O75197 1615 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 PCCAP05165 728 aaPredicted RBP18.09■□□□□ 0.49
CDH20-203ENST00000538374 ADORA1P30542 326 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 DHX32Q7L7V1 743 aaKnown RBP18.09■□□□□ 0.49
CDH20-203ENST00000538374 PRIMPOLQ96LW4 560 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 DENND2AQ9ULE3 1009 aa18.09■□□□□ 0.49
CDH20-203ENST00000538374 POLR3DP05423 398 aaPredicted RBP18.08■□□□□ 0.49
CDH20-203ENST00000538374 SYNE4Q8N205 404 aa18.08■□□□□ 0.49
CDH20-203ENST00000538374 PKNOX2Q96KN3 472 aa18.08■□□□□ 0.49
CDH20-203ENST00000538374 ALDH8A1Q9H2A2 487 aaPredicted RBP18.08■□□□□ 0.49
CDH20-203ENST00000538374 CLIP2Q9UDT6 1046 aa18.08■□□□□ 0.49
CDH20-203ENST00000538374 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
CDH20-203ENST00000538374 ATP2B3Q16720 1220 aa18.08■□□□□ 0.48
CDH20-203ENST00000538374 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
CDH20-203ENST00000538374 ILDR1Q86SU0 546 aaPredicted RBP18.08■□□□□ 0.48
CDH20-203ENST00000538374 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.48
CDH20-203ENST00000538374 IFIT1P09914 478 aaKnown RBP18.07■□□□□ 0.48
CDH20-203ENST00000538374 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
CDH20-203ENST00000538374 HMGN5P82970 282 aaKnown RBP18.07■□□□□ 0.48
CDH20-203ENST00000538374 OSBP2Q969R2 916 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 MAST3O60307 1309 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 A0A1B0GUL7 405 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 GOLGA6L6A8MZA4 724 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 PFKFB2O60825 505 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 VPS72Q15906 364 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
CDH20-203ENST00000538374 NKX2-3Q8TAU0 364 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 ZNF592Q92610 1267 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 SPEF2Q9C093 1822 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 NHSQ6T4R5 1651 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
CDH20-203ENST00000538374 A0A1B0GVL5 298 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 USP27XA6NNY8 438 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 ME1P48163 572 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 SCARF1Q14162 830 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 FILIP1Q7Z7B0 1213 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
CDH20-203ENST00000538374 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 PDIA3P30101 505 aaKnown RBP18.06■□□□□ 0.48
CDH20-203ENST00000538374 NLRP10Q86W26 655 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 CIAO1O76071 339 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 CSF1RP07333 972 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 FDPSP14324 419 aaKnown RBP18.06■□□□□ 0.48
CDH20-203ENST00000538374 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
CDH20-203ENST00000538374 SNW1Q13573 536 aaKnown RBP18.06■□□□□ 0.48
CDH20-203ENST00000538374 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 ISM2Q6H9L7 571 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 RBM43Q6ZSC3 357 aaKnown RBP18.06■□□□□ 0.48
CDH20-203ENST00000538374 GPR108Q9NPR9 543 aa18.06■□□□□ 0.48
CDH20-203ENST00000538374 BTAF1O14981 1849 aa18.05■□□□□ 0.48
CDH20-203ENST00000538374 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
CDH20-203ENST00000538374 EIF5P55010 431 aaKnown RBP18.05■□□□□ 0.48
CDH20-203ENST00000538374 FNBP4Q8N3X1 1017 aaPredicted RBP18.05■□□□□ 0.48
CDH20-203ENST00000538374 ITPK1Q13572 414 aa18.05■□□□□ 0.48
CDH20-203ENST00000538374 IQCB1Q15051 598 aa18.05■□□□□ 0.48
CDH20-203ENST00000538374 TDRD7Q8NHU6 1098 aaKnown RBP18.05■□□□□ 0.48
CDH20-203ENST00000538374 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
CDH20-203ENST00000538374 RFX7Q2KHR2 1363 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 EYA2O00167 538 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 FSIP1Q8NA03 581 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 TRMT1Q9NXH9 659 aaKnown RBP18.04■□□□□ 0.48
CDH20-203ENST00000538374 CFAP45Q9UL16 551 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 BIN1O00499 593 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 RXRAP19793 462 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 FAM89AQ96GI7 184 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 RIC1Q4ADV7 1423 aa18.04■□□□□ 0.48
CDH20-203ENST00000538374 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 SBF2Q86WG5 1849 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 IGSF3O75054 1194 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 U2AF2P26368 475 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDH20-203ENST00000538374 IL15P40933 162 aaPredicted RBP18.03■□□□□ 0.48
CDH20-203ENST00000538374 SIK1P57059 783 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 CLIC4Q9Y696 253 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 SCN7AQ01118 1682 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 RCOR1Q9UKL0 485 aa18.03■□□□□ 0.48
CDH20-203ENST00000538374 GOLGA6L19H0YKK7 550 aa18.02■□□□□ 0.48
CDH20-203ENST00000538374 FOXP2O15409 715 aa18.02■□□□□ 0.48
CDH20-203ENST00000538374 TNNT1P13805 278 aa18.02■□□□□ 0.48
CDH20-203ENST00000538374 GTF2F1P35269 517 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDH20-203ENST00000538374 AIFM3Q96NN9 605 aa18.02■□□□□ 0.48
CDH20-203ENST00000538374 CCDC94Q9BW85 323 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms