RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	SLC35F4	A4IF30	521 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TNFRSF10B	O14763	440 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	MSX1	P28360	303 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	HELQ	Q8TDG4	1101 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RUNDC1	Q96C34	613 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	KLRG1	Q96E93	195 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	NGLY1	Q96IV0	654 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	COG3	Q96JB2	828 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	LRFN2	Q9ULH4	789 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	DYRK1B	Q9Y463	629 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ACE	P12821	1306 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TTC21B	Q7Z4L5	1316 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	MAP2	P11137	1827 aa	Known RBP	7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	USP31	Q70CQ4	1352 aa		7.2	□□□□□ -1.26
NPIPB3-208	ENST00000537983	DCC	P43146	1447 aa		7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	NCOA3	Q9Y6Q9	1424 aa		7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SOWAHD	A6NJG2	315 aa		7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	PTS	Q03393	145 aa		7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ZNF211	Q13398	564 aa	Predicted RBP	7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	NME9	Q86XW9	330 aa		7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	AIDA	Q96BJ3	306 aa		7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	GPC6	Q9Y625	555 aa	Predicted RBP	7.19	□□□□□ -1.26
NPIPB3-208	ENST00000537983	MARF1	Q9Y4F3	1742 aa	Known RBP	7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	LMTK3	Q96Q04	1460 aa		7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	POTEC	B2RU33	542 aa		7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ICMT	O60725	284 aa		7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TAT	P17735	454 aa	Predicted RBP	7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	CCDC146	Q8IYE0	955 aa		7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ZIC5	Q96T25	663 aa		7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	PNN	Q9H307	717 aa	Known RBP	7.18	□□□□□ -1.26
NPIPB3-208	ENST00000537983	APAF1	O14727	1248 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	DIAPH1	O60610	1272 aa	Known RBP	7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ABL1	P00519	1130 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	F11	P03951	625 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	NPR3	P17342	541 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SF3B2	Q13435	895 aa	Known RBP	7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	DGKZ	Q13574	1117 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	MTMR3	Q13615	1198 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ECM1	Q16610	540 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	CCDC27	Q2M243	656 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RHPN1	Q8TCX5	695 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	GZF1	Q9H116	711 aa	Predicted RBP	7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	CRISPLD1	Q9H336	500 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ANO2	Q9NQ90	1003 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	POLK	Q9UBT6	870 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	KIF24	Q5T7B8	1368 aa		7.17	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RGPD1	P0DJD0	1748 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	PEAK1	Q9H792	1746 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	STRCP1	A6NGW2	1772 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983		E9PSI1	815 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983		H3BRB1	525 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	THBS1	P07996	1170 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	FAM26D	Q5JW98	314 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	DUSP27	Q5VZP5	1158 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	CCDC155	Q8N6L0	562 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	NGDN	Q8NEJ9	315 aa	Known RBP	7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TUT1	Q9H6E5	874 aa	Known RBP	7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	GPAM	Q9HCL2	828 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	KLK14	Q9P0G3	267 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RCAN3	Q9UKA8	241 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	BCS1L	Q9Y276	419 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	MAPK8IP3	Q9UPT6	1336 aa		7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	PHRF1	Q9P1Y6	1649 aa	Known RBP	7.16	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RRP1	P56182	461 aa	Known RBP	7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SLFN5	Q08AF3	891 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	C11orf91	Q3C1V1	193 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TRMT2A	Q8IZ69	625 aa	Known RBP	7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SUSD3	Q96L08	255 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	PLEKHF1	Q96S99	279 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RUBCNL	Q9H714	662 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	STIM2	Q9P246	746 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RTL1	A6NKG5	1358 aa		7.15	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TRPM3	Q9HCF6	1732 aa	Predicted RBP	7.15	□□□□□ -1.27
NPIPB3-208	ENST00000537983	STRC	Q7RTU9	1775 aa		7.15	□□□□□ -1.27
NPIPB3-208	ENST00000537983		A0A1W2PNR3	127 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	SBNO1	A3KN83	1393 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	U2SURP	O15042	1029 aa	Known RBP	7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	SLIT3	O75094	1523 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	NFAT5	O94916	1531 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	MPST	P25325	297 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	FLT4	P35916	1363 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	MST1R	Q04912	1400 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	IER5	Q5VY09	327 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	WDR63	Q8IWG1	891 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	ETFBKMT	Q8IXQ9	262 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	TCP11L2	Q8N4U5	519 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	PMFBP1	Q8TBY8	1022 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	HSH2D	Q96JZ2	352 aa		7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	GAS2L1	Q99501	681 aa	Predicted RBP	7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.14	□□□□□ -1.27
NPIPB3-208	ENST00000537983	C1orf167	Q5SNV9	1468 aa		7.13	□□□□□ -1.27
NPIPB3-208	ENST00000537983	ARHGEF10	O15013	1369 aa		7.13	□□□□□ -1.27
NPIPB3-208	ENST00000537983	IL16	Q14005	1332 aa		7.13	□□□□□ -1.27
NPIPB3-208	ENST00000537983	TGFBR3L	H3BV60	316 aa		7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms