RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 NKX1-1Q15270 411 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-218ENST00000537641 FMR1NBQ8N0W7 255 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-218ENST00000537641 DBNDD2Q9BQY9 259 aa14.16□□□□□ -0.14
CPSF7-218ENST00000537641 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
CPSF7-218ENST00000537641 GPR108Q9NPR9 543 aa14.16□□□□□ -0.14
CPSF7-218ENST00000537641 RTEL1Q9NZ71 1219 aa14.16□□□□□ -0.14
CPSF7-218ENST00000537641 ZNF215Q9UL58 517 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-218ENST00000537641 CARMIL3Q8ND23 1372 aa14.16□□□□□ -0.14
CPSF7-218ENST00000537641 TJP1Q07157 1748 aa14.16□□□□□ -0.14
CPSF7-218ENST00000537641 NRDCO43847 1150 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 TPM4P67936 248 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 CEBPZQ03701 1054 aaKnown RBP14.15□□□□□ -0.14
CPSF7-218ENST00000537641 APOBRQ0VD83 1088 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 ADALQ6DHV7 355 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 FILIP1Q7Z7B0 1213 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 SEC62Q99442 399 aaKnown RBP14.15□□□□□ -0.14
CPSF7-218ENST00000537641 YEATS4O95619 227 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 IL2RBP14784 551 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 ME1P48163 572 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 NAA30Q147X3 362 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-218ENST00000537641 ZMYM1Q5SVZ6 1142 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 ZNF771Q7L3S4 317 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-218ENST00000537641 LRRC2Q9BYS8 371 aa14.15□□□□□ -0.14
CPSF7-218ENST00000537641 CCP110O43303 1012 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 KMT5BQ4FZB7 885 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 DDX46Q7L014 1031 aaKnown RBP14.14□□□□□ -0.15
CPSF7-218ENST00000537641 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-218ENST00000537641 NBPF11Q86T75 865 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 KCNG4Q8TDN1 519 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 FTOQ9C0B1 505 aaKnown RBP eCLIP14.14□□□□□ -0.15
CPSF7-218ENST00000537641 L2HGDHQ9H9P8 463 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-218ENST00000537641 TNS2Q63HR2 1409 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 TOGARAM1Q9Y4F4 1720 aa14.14□□□□□ -0.15
CPSF7-218ENST00000537641 E7EWF7 191 aa14.13□□□□□ -0.15
CPSF7-218ENST00000537641 PIP4K2AP48426 406 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-218ENST00000537641 EVCP57679 992 aa14.13□□□□□ -0.15
CPSF7-218ENST00000537641 PAG1Q9NWQ8 432 aa14.13□□□□□ -0.15
CPSF7-218ENST00000537641 PCDHA7Q9UN72 937 aa14.13□□□□□ -0.15
CPSF7-218ENST00000537641 C4AP0C0L4 1744 aa14.13□□□□□ -0.15
CPSF7-218ENST00000537641 C4BP0C0L5 1744 aa14.13□□□□□ -0.15
CPSF7-218ENST00000537641 SLFN14P0C7P3 912 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 PDIA3P30101 505 aaKnown RBP14.12□□□□□ -0.15
CPSF7-218ENST00000537641 ZRSR1Q15695 479 aaKnown RBP14.12□□□□□ -0.15
CPSF7-218ENST00000537641 UBE3BQ7Z3V4 1068 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.12□□□□□ -0.15
CPSF7-218ENST00000537641 KIAA1468Q9P260 1216 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 A0A087WZG4 1122 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 NBPF26B4DH59 902 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 FOSBP53539 338 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 CASP7P55210 303 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 NLRP12P59046 1061 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
CPSF7-218ENST00000537641 STK38Q15208 465 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 ELF2Q15723 593 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 NBPF10Q6P3W6 841 aaKnown RBP14.12□□□□□ -0.15
CPSF7-218ENST00000537641 FBXO38Q6PIJ6 1188 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 BRAPQ7Z569 592 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 NBPF15Q8N660 670 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 LINC00301Q8NCQ3 95 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 SDF4Q9BRK5 362 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 POLR3EQ9NVU0 708 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
CPSF7-218ENST00000537641 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
CPSF7-218ENST00000537641 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
CPSF7-218ENST00000537641 PPP1R13BQ96KQ4 1090 aa14.11□□□□□ -0.15
CPSF7-218ENST00000537641 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
CPSF7-218ENST00000537641 MAST3O60307 1309 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 NEDD4P46934 1319 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 IKBKBO14920 756 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 CHGBP05060 677 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 HSPD1P10809 573 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 SF3A1Q15459 793 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 TERF2Q15554 542 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 E4F1Q66K89 784 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 XPO4Q9C0E2 1151 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 NDUFB9Q9Y6M9 179 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 PHLPP2Q6ZVD8 1323 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 H7C1W4 665 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 GOLIM4O00461 696 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 DHX16O60231 1041 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 SMC2O95347 1197 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 FDPSP14324 419 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 H2AFXP16104 143 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 NDUFA8P51970 172 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 TMC6Q7Z403 805 aa14.1□□□□□ -0.15
CPSF7-218ENST00000537641 NCOA5Q9HCD5 579 aaKnown RBP14.1□□□□□ -0.15
CPSF7-218ENST00000537641 ITGB4P16144 1822 aa14.09□□□□□ -0.15
CPSF7-218ENST00000537641 CCDC66A2RUB6 948 aa14.09□□□□□ -0.15
CPSF7-218ENST00000537641 SPTLC2O15270 562 aa14.09□□□□□ -0.15
CPSF7-218ENST00000537641 MYO1BO43795 1136 aa14.09□□□□□ -0.15
CPSF7-218ENST00000537641 SLC3A2P08195 630 aaKnown RBP14.09□□□□□ -0.15
CPSF7-218ENST00000537641 IL15P40933 162 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-218ENST00000537641 EVA1CP58658 441 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms