RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 WDR90Q96KV7 1748 aa10.13□□□□□ -0.79
CCDC60-203ENST00000536742 DUOX2Q9NRD8 1548 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 GCC2Q8IWJ2 1684 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 SPATA31A5Q5VU36 1347 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 SPATA31A3Q5VYP0 1347 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 SPATA31A7Q8IWB4 1347 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 PLSCR1O15162 318 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 MSX1P28360 303 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 MARSP56192 900 aaKnown RBP10.12□□□□□ -0.79
CCDC60-203ENST00000536742 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
CCDC60-203ENST00000536742 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 ZNF526Q8TF50 670 aaPredicted RBP10.12□□□□□ -0.79
CCDC60-203ENST00000536742 MKNK1Q9BUB5 465 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 ENAMQ9NRM1 1142 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 PARP3Q9Y6F1 533 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 LMTK2Q8IWU2 1503 aa10.12□□□□□ -0.79
CCDC60-203ENST00000536742 TOMM70O94826 608 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 MX2P20592 715 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 ATP4AP20648 1035 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 TXLNAP40222 546 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 RHPN1Q8TCX5 695 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 HELQQ8TDG4 1101 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 HCN4Q9Y3Q4 1203 aa10.11□□□□□ -0.79
CCDC60-203ENST00000536742 KCNMA1Q12791 1236 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 SH3PXD2AQ5TCZ1 1133 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 IER5Q5VY09 327 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 LYPD4Q6UWN0 246 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 NLRP8Q86W28 1048 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 RGPD3A6NKT7 1758 aaPredicted RBP10.1□□□□□ -0.79
CCDC60-203ENST00000536742 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
CCDC60-203ENST00000536742 MLLT1Q03111 559 aaPredicted RBP10.09□□□□□ -0.79
CCDC60-203ENST00000536742 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
CCDC60-203ENST00000536742 EFHC2Q5JST6 749 aa10.09□□□□□ -0.79
CCDC60-203ENST00000536742 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
CCDC60-203ENST00000536742 NRAPQ86VF7 1730 aa10.09□□□□□ -0.79
CCDC60-203ENST00000536742 ADCY9O60503 1353 aa10.09□□□□□ -0.79
CCDC60-203ENST00000536742 GOLGB1Q14789 3259 aaKnown RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 CELA2BP08218 269 aaPredicted RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 HSPA1AP0DMV8 641 aaKnown RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 HSPA1BP0DMV9 641 aaKnown RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 BRD2P25440 801 aaKnown RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 FIGNL1Q6PIW4 674 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 ABTB2Q8N961 1025 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 GTF3C2Q8WUA4 911 aaPredicted RBP10.08□□□□□ -0.8
CCDC60-203ENST00000536742 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 CFHR5Q9BXR6 569 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 RUBCNLQ9H714 662 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 NEUROD4Q9HD90 331 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 STK32BQ9NY57 414 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 SEPT3Q9UH03 358 aa10.08□□□□□ -0.8
CCDC60-203ENST00000536742 ERBINQ96RT1 1412 aa10.07□□□□□ -0.8
CCDC60-203ENST00000536742 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
CCDC60-203ENST00000536742 FKBP4Q02790 459 aaKnown RBP eCLIP10.07□□□□□ -0.8
CCDC60-203ENST00000536742 COX20Q5RI15 118 aa10.07□□□□□ -0.8
CCDC60-203ENST00000536742 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
CCDC60-203ENST00000536742 ZIC5Q96T25 663 aa10.07□□□□□ -0.8
CCDC60-203ENST00000536742 IVNS1ABPQ9Y6Y0 642 aa10.07□□□□□ -0.8
CCDC60-203ENST00000536742 METP08581 1390 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 NPR3P17342 541 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 SLC15A2Q16348 729 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 TMEM151AQ8N4L1 468 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 SCARF2Q96GP6 870 aaPredicted RBP10.06□□□□□ -0.8
CCDC60-203ENST00000536742 STIM2Q9P246 746 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 GJA3Q9Y6H8 435 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 PCNTO95613 3336 aa10.06□□□□□ -0.8
CCDC60-203ENST00000536742 RRBP1Q9P2E9 1410 aaKnown RBP10.06□□□□□ -0.8
CCDC60-203ENST00000536742 A0A1W2PNR3 127 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 TGFBR3LH3BV60 316 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 ICMTO60725 284 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 FAM13AO94988 1023 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 BCRP11274 1271 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 NAA30Q147X3 362 aaPredicted RBP10.05□□□□□ -0.8
CCDC60-203ENST00000536742 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 CCDC144AA2RUR9 1427 aa10.05□□□□□ -0.8
CCDC60-203ENST00000536742 GDF11O95390 407 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 YBX3P16989 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC60-203ENST00000536742 MAP2K3P46734 347 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 RASSF7Q02833 373 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 DGKZQ13574 1117 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 LRFN2Q9ULH4 789 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 DNMT3AQ9Y6K1 912 aaPredicted RBP10.04□□□□□ -0.8
CCDC60-203ENST00000536742 CEP162Q5TB80 1403 aa10.04□□□□□ -0.8
CCDC60-203ENST00000536742 SOWAHDA6NJG2 315 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 ABL1P00519 1130 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 SERPINB4P48594 390 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 SAP130Q9H0E3 1048 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 COL14A1Q05707 1796 aaKnown RBP10.03□□□□□ -0.8
CCDC60-203ENST00000536742 USP19O94966 1318 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
CCDC60-203ENST00000536742 TNFRSF10BO14763 440 aa10.02□□□□□ -0.81
CCDC60-203ENST00000536742 IRS1P35568 1242 aa10.02□□□□□ -0.81
CCDC60-203ENST00000536742 RGS19P49795 217 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms