RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 TAF1P21675 1872 aa25.22■■□□□ 1.63
TRIM3-214ENST00000536344 ZKSCAN1P17029 563 aaPredicted RBP25.22■■□□□ 1.63
TRIM3-214ENST00000536344 PHKA1P46020 1223 aa25.22■■□□□ 1.63
TRIM3-214ENST00000536344 CCDC183Q5T5S1 534 aa25.22■■□□□ 1.63
TRIM3-214ENST00000536344 PLCD3Q8N3E9 789 aa25.22■■□□□ 1.63
TRIM3-214ENST00000536344 PDE8BO95263 885 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 MCAMP43121 646 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 MCMDC2Q4G0Z9 681 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 VGLL2Q8N8G2 317 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 WASHC4Q2M389 1173 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 TTC14Q96N46 770 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 OGFRQ9NZT2 677 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 CTNNA3Q9UI47 895 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 ZNF652Q9Y2D9 606 aa25.21■■□□□ 1.63
TRIM3-214ENST00000536344 PDRG1Q9NUG6 133 aa25.2■■□□□ 1.62
TRIM3-214ENST00000536344 PARP10Q53GL7 1025 aa25.2■■□□□ 1.62
TRIM3-214ENST00000536344 TRPC5Q9UL62 973 aaPredicted RBP25.2■■□□□ 1.62
TRIM3-214ENST00000536344 IQSEC3Q9UPP2 1182 aaPredicted RBP25.2■■□□□ 1.62
TRIM3-214ENST00000536344 COL4A1P02462 1669 aa25.19■■□□□ 1.62
TRIM3-214ENST00000536344 SLFN14P0C7P3 912 aa25.19■■□□□ 1.62
TRIM3-214ENST00000536344 M0R2C6 588 aa25.19■■□□□ 1.62
TRIM3-214ENST00000536344 C16orf45Q96MC5 204 aaPredicted RBP25.19■■□□□ 1.62
TRIM3-214ENST00000536344 OSBP2Q969R2 916 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 CYP46A1Q9Y6A2 500 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 PTGS1P23219 599 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 NECAB1Q8N987 351 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 FEZ1Q99689 392 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 LRRC2Q9BYS8 371 aa25.18■■□□□ 1.62
TRIM3-214ENST00000536344 COL5A3P25940 1745 aaPredicted RBP25.18■■□□□ 1.62
TRIM3-214ENST00000536344 CCDC152Q4G0S7 254 aa25.17■■□□□ 1.62
TRIM3-214ENST00000536344 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
TRIM3-214ENST00000536344 FIBPO43427 364 aa25.17■■□□□ 1.62
TRIM3-214ENST00000536344 ZPR1O75312 459 aa25.17■■□□□ 1.62
TRIM3-214ENST00000536344 LRMPQ12912 555 aa25.17■■□□□ 1.62
TRIM3-214ENST00000536344 CCDC102BQ68D86 513 aa25.17■■□□□ 1.62
TRIM3-214ENST00000536344 MAST3O60307 1309 aa25.16■■□□□ 1.62
TRIM3-214ENST00000536344 TTLL5Q6EMB2 1281 aa25.16■■□□□ 1.62
TRIM3-214ENST00000536344 SLC51AQ86UW1 340 aa25.16■■□□□ 1.62
TRIM3-214ENST00000536344 FBXO3Q9UK99 471 aa25.16■■□□□ 1.62
TRIM3-214ENST00000536344 RTCBQ9Y3I0 505 aaKnown RBP25.16■■□□□ 1.62
TRIM3-214ENST00000536344 RNF113AO15541 343 aaKnown RBP25.16■■□□□ 1.62
TRIM3-214ENST00000536344 EPB41L2O43491 1005 aaKnown RBP25.16■■□□□ 1.62
TRIM3-214ENST00000536344 FAM196AQ6ZSG2 479 aa25.16■■□□□ 1.62
TRIM3-214ENST00000536344 CYP21A2P08686 494 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 MCM2P49736 904 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 IRX5P78411 483 aaPredicted RBP25.15■■□□□ 1.62
TRIM3-214ENST00000536344 CCDC83Q8IWF9 413 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 ZSWIM6Q9HCJ5 1215 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 SPEF2Q9C093 1822 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 IDH1O75874 414 aaKnown RBP25.15■■□□□ 1.62
TRIM3-214ENST00000536344 TRIM37O94972 964 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 FUCA2Q9BTY2 467 aa25.15■■□□□ 1.62
TRIM3-214ENST00000536344 NPHP1O15259 732 aa25.14■■□□□ 1.62
TRIM3-214ENST00000536344 RPS6KA4O75676 772 aa25.14■■□□□ 1.62
TRIM3-214ENST00000536344 IL17RAQ96F46 866 aa25.14■■□□□ 1.62
TRIM3-214ENST00000536344 CNTNAP4Q9C0A0 1308 aa25.14■■□□□ 1.62
TRIM3-214ENST00000536344 THSD7AQ9UPZ6 1657 aa25.14■■□□□ 1.62
TRIM3-214ENST00000536344 ZMYM1Q5SVZ6 1142 aa25.14■■□□□ 1.62
TRIM3-214ENST00000536344 PUS7LQ9H0K6 701 aaKnown RBP25.14■■□□□ 1.62
TRIM3-214ENST00000536344 ABCC12Q96J65 1359 aa25.14■■□□□ 1.61
TRIM3-214ENST00000536344 IGHMBP2P38935 993 aaKnown RBP25.14■■□□□ 1.61
TRIM3-214ENST00000536344 BCAMP50895 628 aa25.14■■□□□ 1.61
TRIM3-214ENST00000536344 STK3Q13188 491 aa25.14■■□□□ 1.61
TRIM3-214ENST00000536344 INTS4Q96HW7 963 aaKnown RBP25.14■■□□□ 1.61
TRIM3-214ENST00000536344 LIMCH1Q9UPQ0 1083 aa25.14■■□□□ 1.61
TRIM3-214ENST00000536344 NBPF5PQ86XG9 351 aaPredicted RBP25.13■■□□□ 1.61
TRIM3-214ENST00000536344 SETDB2Q96T68 719 aa25.13■■□□□ 1.61
TRIM3-214ENST00000536344 PIH1D3Q9NQM4 214 aaKnown RBP25.13■■□□□ 1.61
TRIM3-214ENST00000536344 HAND2P61296 217 aa25.13■■□□□ 1.61
TRIM3-214ENST00000536344 PUM3Q15397 648 aaKnown RBP25.13■■□□□ 1.61
TRIM3-214ENST00000536344 RNF20Q5VTR2 975 aa25.13■■□□□ 1.61
TRIM3-214ENST00000536344 WDR33Q9C0J8 1336 aaKnown RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 MYO5AQ9Y4I1 1855 aaKnown RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 DDX60Q8IY21 1712 aaKnown RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 BLOC1S2Q6QNY1 142 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 CLEC4GQ6UXB4 293 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 NARFQ9UHQ1 456 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 NRBP1Q9UHY1 535 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 DDX41Q9UJV9 622 aaKnown RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 RPAP1Q9BWH6 1393 aaPredicted RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 HSPD1P10809 573 aaKnown RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 CHRNDQ07001 517 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 CHST3Q7LGC8 479 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 CELF1Q92879 486 aaKnown RBP25.12■■□□□ 1.61
TRIM3-214ENST00000536344 TPCN1Q9ULQ1 816 aa25.12■■□□□ 1.61
TRIM3-214ENST00000536344 RREB1Q92766 1687 aa25.11■■□□□ 1.61
TRIM3-214ENST00000536344 ME3Q16798 604 aa25.11■■□□□ 1.61
TRIM3-214ENST00000536344 KCNB2Q92953 911 aa25.11■■□□□ 1.61
TRIM3-214ENST00000536344 TAF3Q5VWG9 929 aa25.11■■□□□ 1.61
TRIM3-214ENST00000536344 STOX1Q6ZVD7 989 aa25.11■■□□□ 1.61
TRIM3-214ENST00000536344 RFC4P35249 363 aa25.1■■□□□ 1.61
TRIM3-214ENST00000536344 SLC9C2Q5TAH2 1124 aa25.1■■□□□ 1.61
TRIM3-214ENST00000536344 LPIN2Q92539 896 aa25.1■■□□□ 1.61
TRIM3-214ENST00000536344 AK7Q96M32 723 aa25.1■■□□□ 1.61
TRIM3-214ENST00000536344 ERICH4A6NGS2 130 aa25.1■■□□□ 1.61
TRIM3-214ENST00000536344 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.1■■□□□ 1.61
TRIM3-214ENST00000536344 V9GYY5 206 aaPredicted RBP25.1■■□□□ 1.61
TRIM3-214ENST00000536344 MROH5Q6ZUA9 1318 aa25.1■■□□□ 1.61
TRIM3-214ENST00000536344 ST7Q9NRC1 585 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms