RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 VPS33BQ9H267 617 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 AKAP11Q9UKA4 1901 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 SEMA3EO15041 775 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 LARGE2Q8N3Y3 721 aa13.99□□□□□ -0.17
CDCA3-206ENST00000536241 ECE2O60344 883 aa13.98□□□□□ -0.17
CDCA3-206ENST00000536241 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
CDCA3-206ENST00000536241 RASSF7Q02833 373 aa13.98□□□□□ -0.17
CDCA3-206ENST00000536241 PODNQ7Z5L7 613 aa13.98□□□□□ -0.17
CDCA3-206ENST00000536241 KBTBD3Q8NAB2 608 aa13.98□□□□□ -0.17
CDCA3-206ENST00000536241 PIH1D3Q9NQM4 214 aaKnown RBP13.98□□□□□ -0.17
CDCA3-206ENST00000536241 ZBTB22O15209 634 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 GTF2IP78347 998 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
CDCA3-206ENST00000536241 GPR162Q16538 588 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 TTLL5Q6EMB2 1281 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 FSD1Q9BTV5 496 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 FER1L6Q2WGJ9 1857 aa13.97□□□□□ -0.17
CDCA3-206ENST00000536241 CHD4Q14839 1912 aa13.96□□□□□ -0.17
CDCA3-206ENST00000536241 ARFGEF1Q9Y6D6 1849 aa13.96□□□□□ -0.17
CDCA3-206ENST00000536241 PRELPP51888 382 aa13.96□□□□□ -0.17
CDCA3-206ENST00000536241 WDR66Q8TBY9 1149 aa13.96□□□□□ -0.17
CDCA3-206ENST00000536241 FBXW7Q969H0 707 aa13.96□□□□□ -0.17
CDCA3-206ENST00000536241 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.17
CDCA3-206ENST00000536241 LTBP3Q9NS15 1303 aa13.96□□□□□ -0.18
CDCA3-206ENST00000536241 YDJCA8MPS7 323 aa13.95□□□□□ -0.18
CDCA3-206ENST00000536241 IDH1O75874 414 aaKnown RBP13.95□□□□□ -0.18
CDCA3-206ENST00000536241 CHGBP05060 677 aa13.95□□□□□ -0.18
CDCA3-206ENST00000536241 CHMLP26374 656 aa13.95□□□□□ -0.18
CDCA3-206ENST00000536241 SLFNL1Q499Z3 407 aa13.95□□□□□ -0.18
CDCA3-206ENST00000536241 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-206ENST00000536241 FAM205AQ6ZU69 1335 aa13.95□□□□□ -0.18
CDCA3-206ENST00000536241 CDC45O75419 566 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 GRIK5Q16478 980 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 C8orf34Q49A92 452 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 MXD3Q9BW11 206 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
CDCA3-206ENST00000536241 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
CDCA3-206ENST00000536241 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 MAP3K12Q12852 859 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 SLC9C2Q5TAH2 1124 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 RAI14Q9P0K7 980 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
CDCA3-206ENST00000536241 RNF113AO15541 343 aaKnown RBP13.93□□□□□ -0.18
CDCA3-206ENST00000536241 RAD17O75943 681 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 PRDX5P30044 214 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 STRIP1Q5VSL9 837 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 SPTY2D1Q68D10 685 aaPredicted RBP13.93□□□□□ -0.18
CDCA3-206ENST00000536241 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
CDCA3-206ENST00000536241 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
CDCA3-206ENST00000536241 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDCA3-206ENST00000536241 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
CDCA3-206ENST00000536241 SALL1Q9NSC2 1324 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 HIP1O00291 1037 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 LDHBP07195 334 aaKnown RBP13.92□□□□□ -0.18
CDCA3-206ENST00000536241 LMNB1P20700 586 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
CDCA3-206ENST00000536241 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 CERS5Q8N5B7 392 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 MAGEB6Q8N7X4 407 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 FAM227BQ96M60 508 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 COL4A5P29400 1685 aa13.92□□□□□ -0.18
CDCA3-206ENST00000536241 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 MYH13Q9UKX3 1938 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 SEC24BO95487 1268 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 ZFYP08048 801 aaPredicted RBP13.91□□□□□ -0.18
CDCA3-206ENST00000536241 PDE6AP16499 860 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 ADD2P35612 726 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 MECOMQ03112 1051 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 CXCL9Q07325 125 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 LRRFIP1Q32MZ4 808 aaKnown RBP13.91□□□□□ -0.18
CDCA3-206ENST00000536241 DACT2Q5SW24 774 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
CDCA3-206ENST00000536241 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 ZNF532Q9HCE3 1301 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 CCDC88AQ3V6T2 1871 aa13.91□□□□□ -0.18
CDCA3-206ENST00000536241 SCN9AQ15858 1988 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 F8W031 263 aaPredicted RBP13.9□□□□□ -0.18
CDCA3-206ENST00000536241 PSMD14O00487 310 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 GRIN3BO60391 1043 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 VIL1P09327 827 aaKnown RBP13.9□□□□□ -0.18
CDCA3-206ENST00000536241 UBE3CQ15386 1083 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 ZMYM1Q5SVZ6 1142 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 ZNF384Q8TF68 577 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
CDCA3-206ENST00000536241 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
CDCA3-206ENST00000536241 IL25Q9H293 177 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms