RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 NDUFB9Q9Y6M9 179 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 GBP3Q9H0R5 595 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 RTL9Q8NET4 1388 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 GNPATO15228 680 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 CALM1P0DP23 149 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 CALM2P0DP24 149 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 CALM3P0DP25 149 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 ATP5JP18859 108 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 CCDC87Q9NVE4 849 aa19.73■□□□□ 0.75
PHRF1-206ENST00000534320 TNIP1Q15025 636 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 GPATCH11Q8N954 259 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.72■□□□□ 0.751e-7■□□□□ 10.8
PHRF1-206ENST00000534320 AMPD3Q01432 767 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 TNNT1P13805 278 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 TCIRG1Q13488 830 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 TRMT1Q9NXH9 659 aaKnown RBP19.72■□□□□ 0.75
PHRF1-206ENST00000534320 NSFL1CQ9UNZ2 370 aaKnown RBP19.72■□□□□ 0.75
PHRF1-206ENST00000534320 FGFR1OPO95684 399 aaKnown RBP19.72■□□□□ 0.75
PHRF1-206ENST00000534320 DNAJC25Q9H1X3 360 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.72■□□□□ 0.758e-7■■■□□ 17.4
PHRF1-206ENST00000534320 RXRAP19793 462 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 IQCEQ6IPM2 695 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 BRAPQ7Z569 592 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 CCDC148Q8NFR7 591 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 CPLX3Q8WVH0 158 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 C16orf45Q96MC5 204 aaPredicted RBP19.72■□□□□ 0.75
PHRF1-206ENST00000534320 MCM9Q9NXL9 1143 aa19.72■□□□□ 0.75
PHRF1-206ENST00000534320 ZHX1Q9UKY1 873 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-206ENST00000534320 TYRO3Q06418 890 aa19.71■□□□□ 0.75
PHRF1-206ENST00000534320 CABP5Q9NP86 173 aa19.71■□□□□ 0.75
PHRF1-206ENST00000534320 DENND2AQ9ULE3 1009 aa19.71■□□□□ 0.75
PHRF1-206ENST00000534320 ALKQ9UM73 1620 aa19.71■□□□□ 0.75
PHRF1-206ENST00000534320 PPP1R12BO60237 982 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-206ENST00000534320 GPAA1O43292 621 aa19.7■□□□□ 0.74
PHRF1-206ENST00000534320 BBXQ8WY36 941 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-206ENST00000534320 EAF2Q96CJ1 260 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-206ENST00000534320 ABCA6Q8N139 1617 aa19.7■□□□□ 0.74
PHRF1-206ENST00000534320 F8W031 263 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-206ENST00000534320 NUP88Q99567 741 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-206ENST00000534320 SSH2Q76I76 1423 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 ERBB4Q15303 1308 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 TRIM75PA6NK02 468 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 KIF20AO95235 890 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 SPA17Q15506 151 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 PROSER3Q2NL68 480 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 LPIN2Q92539 896 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 KIF5CO60282 957 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 LDHBP07195 334 aaKnown RBP19.69■□□□□ 0.74
PHRF1-206ENST00000534320 IDEP14735 1019 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 HEATR3Q7Z4Q2 680 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 TTLL7Q6ZT98 887 aa19.69■□□□□ 0.74
PHRF1-206ENST00000534320 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
PHRF1-206ENST00000534320 B4E1Z4 1266 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 TRAPPC3LQ5T215 181 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 ATL3Q6DD88 541 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 SEPT11Q9NVA2 429 aaKnown RBP19.68■□□□□ 0.74
PHRF1-206ENST00000534320 AFMP43652 599 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 CACNA2D4Q7Z3S7 1137 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 IPO4Q8TEX9 1081 aaKnown RBP19.68■□□□□ 0.74
PHRF1-206ENST00000534320 UBA5Q9GZZ9 404 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 URI1O94763 535 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-206ENST00000534320 PICALMQ13492 652 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 CCDC150Q8NCX0 1101 aa19.68■□□□□ 0.74
PHRF1-206ENST00000534320 EDC3Q96F86 508 aaKnown RBP19.68■□□□□ 0.74
PHRF1-206ENST00000534320 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-206ENST00000534320 YEATS4O95619 227 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 PLCG2P16885 1265 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 TMEM87BQ96K49 555 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 ARMT1Q9H993 441 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 MTIF2P46199 727 aaKnown RBP19.67■□□□□ 0.74
PHRF1-206ENST00000534320 AOPEPQ8N6M6 819 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 TIGD1Q96MW7 591 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 ZKSCAN3Q9BRR0 538 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 ENOX2Q16206 610 aaKnown RBP19.67■□□□□ 0.74
PHRF1-206ENST00000534320 ZNF830Q96NB3 372 aaPredicted RBP19.67■□□□□ 0.74
PHRF1-206ENST00000534320 ZC3H12CQ9C0D7 883 aaKnown RBP19.67■□□□□ 0.74
PHRF1-206ENST00000534320 JAG2Q9Y219 1238 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 TAF5LO75529 589 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 ZAP70P43403 619 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 EHMT1Q9H9B1 1298 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 CEP152O94986 1710 aa19.67■□□□□ 0.74
PHRF1-206ENST00000534320 SETBP1Q9Y6X0 1596 aa19.66■□□□□ 0.74
PHRF1-206ENST00000534320 RMND1Q9NWS8 449 aa19.66■□□□□ 0.74
PHRF1-206ENST00000534320 STAP2Q9UGK3 403 aa19.66■□□□□ 0.74
PHRF1-206ENST00000534320 CASQ1P31415 396 aa19.66■□□□□ 0.74
PHRF1-206ENST00000534320 UBASH3AP57075 661 aa19.66■□□□□ 0.74
PHRF1-206ENST00000534320 MROH5Q6ZUA9 1318 aa19.66■□□□□ 0.74
PHRF1-206ENST00000534320 SEPT7Q16181 437 aaKnown RBP19.66■□□□□ 0.74
PHRF1-206ENST00000534320 ANKARQ7Z5J8 1434 aa19.65■□□□□ 0.74
PHRF1-206ENST00000534320 CALML3P27482 149 aa19.65■□□□□ 0.74
PHRF1-206ENST00000534320 CRACR2AQ9BSW2 395 aa19.65■□□□□ 0.74
PHRF1-206ENST00000534320 NCOA5Q9HCD5 579 aaKnown RBP19.65■□□□□ 0.74
PHRF1-206ENST00000534320 EZRP15311 586 aaKnown RBP19.65■□□□□ 0.74
PHRF1-206ENST00000534320 KRT2P35908 639 aa19.65■□□□□ 0.74
PHRF1-206ENST00000534320 CCDC186Q7Z3E2 898 aa19.65■□□□□ 0.74
PHRF1-206ENST00000534320 FEZ1Q99689 392 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms