RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 LAMB4A4D0S4 1761 aa7.83□□□□□ -1.16
CMTM1-220ENST00000534143 LRP5O75197 1615 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 APBB1O00213 710 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 PTCD1O75127 700 aaKnown RBP7.82□□□□□ -1.16
CMTM1-220ENST00000534143 SF3B2Q13435 895 aaKnown RBP7.82□□□□□ -1.16
CMTM1-220ENST00000534143 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 INTS6LQ5JSJ4 861 aaKnown RBP7.82□□□□□ -1.16
CMTM1-220ENST00000534143 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 FAM196AQ6ZSG2 479 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.82□□□□□ -1.16
CMTM1-220ENST00000534143 ARHGAP45Q92619 1136 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 SMARCC1Q92922 1105 aaPredicted RBP7.82□□□□□ -1.16
CMTM1-220ENST00000534143 SLC4A9Q96Q91 983 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 PURBQ96QR8 312 aaKnown RBP7.82□□□□□ -1.16
CMTM1-220ENST00000534143 CHMP4AQ9BY43 222 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 PGPEP1Q9NXJ5 209 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 NDUFB9Q9Y6M9 179 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 ZNF831Q5JPB2 1677 aa7.82□□□□□ -1.16
CMTM1-220ENST00000534143 CICQ96RK0 1608 aaPredicted RBP7.81□□□□□ -1.16
CMTM1-220ENST00000534143 TJP1Q07157 1748 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 NUP188Q5SRE5 1749 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 FBXO45P0C2W1 286 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 EIF2S2P20042 333 aaKnown RBP7.81□□□□□ -1.16
CMTM1-220ENST00000534143 PDE3AQ14432 1141 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 ZKSCAN2Q63HK3 967 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 G2E3Q7L622 706 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 MEIOBQ8N635 442 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 TEX13AQ9BXU3 409 aaPredicted RBP7.81□□□□□ -1.16
CMTM1-220ENST00000534143 NOB1Q9ULX3 412 aaKnown RBP7.81□□□□□ -1.16
CMTM1-220ENST00000534143 TNNQ9UQP3 1299 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 RREB1Q92766 1687 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 LY75O60449 1722 aa7.81□□□□□ -1.16
CMTM1-220ENST00000534143 KIF16BQ96L93 1317 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 ESPNB1AK53 854 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 IPO8O15397 1037 aaKnown RBP7.8□□□□□ -1.16
CMTM1-220ENST00000534143 GPR37L1O60883 481 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 C20orf194Q5TEA3 1177 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 TREML4Q6UXN2 200 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 Q6ZVU0 165 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 LRP10Q7Z4F1 713 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 DNAJC10Q8IXB1 793 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 FRAT1Q92837 279 aaPredicted RBP7.8□□□□□ -1.16
CMTM1-220ENST00000534143 STK31Q9BXU1 1019 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 DDX21Q9NR30 783 aaKnown RBP eCLIP7.8□□□□□ -1.16
CMTM1-220ENST00000534143 CHPF2Q9P2E5 772 aa7.8□□□□□ -1.16
CMTM1-220ENST00000534143 DBF4Q9UBU7 674 aaPredicted RBP7.8□□□□□ -1.16
CMTM1-220ENST00000534143 ERBB4Q15303 1308 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 LOC102724428A0A0B4J2F2 783 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 UPP2O95045 317 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 CYP19A1P11511 503 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-220ENST00000534143 TRIM27P14373 513 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 BAG6P46379 1132 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 SIK1P57059 783 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 IRX6P78412 446 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-220ENST00000534143 NR1H3Q13133 447 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 PROSER3Q2NL68 480 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-220ENST00000534143 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
CMTM1-220ENST00000534143 ATF7IPQ6VMQ6 1270 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 PHAXQ9H814 394 aaKnown RBP7.79□□□□□ -1.16
CMTM1-220ENST00000534143 PALLDQ8WX93 1383 aa7.79□□□□□ -1.16
CMTM1-220ENST00000534143 PTPRCP08575 1304 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 COL5A3P25940 1745 aaPredicted RBP7.78□□□□□ -1.16
CMTM1-220ENST00000534143 TRIM37O94972 964 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 ANXA1P04083 346 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 A1BGP04217 495 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 NEFLP07196 543 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 RLBP1P12271 317 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 BMP2P12643 396 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 NFX1Q12986 1120 aaKnown RBP7.78□□□□□ -1.16
CMTM1-220ENST00000534143 FLIIQ13045 1269 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 CBLBQ13191 982 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 ITPK1Q13572 414 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 C6orf118Q5T5N4 469 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 ERICH6BQ5W0A0 696 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
CMTM1-220ENST00000534143 PANK1Q8TE04 598 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
CMTM1-220ENST00000534143 API5Q9BZZ5 524 aaKnown RBP7.78□□□□□ -1.16
CMTM1-220ENST00000534143 HYPKQ9NX55 129 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 MYH14Q7Z406 1995 aaKnown RBP7.78□□□□□ -1.16
CMTM1-220ENST00000534143 TAF1LQ8IZX4 1826 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 ABCC4O15439 1325 aa7.78□□□□□ -1.16
CMTM1-220ENST00000534143 TERTO14746 1132 aaKnown RBP7.77□□□□□ -1.17
CMTM1-220ENST00000534143 STARD3NLO95772 234 aa7.77□□□□□ -1.17
CMTM1-220ENST00000534143 CANXP27824 592 aaKnown RBP7.77□□□□□ -1.17
CMTM1-220ENST00000534143 MCCD1P59942 119 aaPredicted RBP7.77□□□□□ -1.17
CMTM1-220ENST00000534143 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
CMTM1-220ENST00000534143 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
CMTM1-220ENST00000534143 CRBNQ96SW2 442 aa7.77□□□□□ -1.17
CMTM1-220ENST00000534143 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
CMTM1-220ENST00000534143 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.17
CMTM1-220ENST00000534143 ERVH48-1M5A8F1 160 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 PLSCR1O15162 318 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 WFS1O76024 890 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 MYL6BP14649 208 aa7.76□□□□□ -1.17
CMTM1-220ENST00000534143 PIP4K2AP48426 406 aaPredicted RBP7.76□□□□□ -1.17
CMTM1-220ENST00000534143 RAB15P59190 212 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms