RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 C9orf131Q5VYM1 1079 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 SPATA5Q8NB90 893 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 JDP2Q8WYK2 163 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 HAUS7Q99871 368 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 BOLA2Q9H3K6 86 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 DENND2AQ9ULE3 1009 aa14.54□□□□□ -0.08
COMMD9-208ENST00000533643 COL1A1P02452 1464 aaPredicted RBP14.54□□□□□ -0.08
COMMD9-208ENST00000533643 PDS5AQ29RF7 1337 aaKnown RBP14.53□□□□□ -0.08
COMMD9-208ENST00000533643 FAM205AQ6ZU69 1335 aa14.53□□□□□ -0.08
COMMD9-208ENST00000533643 ZAP70P43403 619 aa14.53□□□□□ -0.08
COMMD9-208ENST00000533643 CHAF1AQ13111 956 aaPredicted RBP14.53□□□□□ -0.08
COMMD9-208ENST00000533643 RNF181Q9P0P0 153 aa14.53□□□□□ -0.08
COMMD9-208ENST00000533643 JAG2Q9Y219 1238 aa14.53□□□□□ -0.08
COMMD9-208ENST00000533643 NDUFB9Q9Y6M9 179 aa14.53□□□□□ -0.08
COMMD9-208ENST00000533643 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
COMMD9-208ENST00000533643 FZD9O00144 591 aa14.52□□□□□ -0.09
COMMD9-208ENST00000533643 GTF2IP78347 998 aa14.52□□□□□ -0.09
COMMD9-208ENST00000533643 TTLL5Q6EMB2 1281 aa14.52□□□□□ -0.09
COMMD9-208ENST00000533643 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
COMMD9-208ENST00000533643 UTRNP46939 3433 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 USP17L3A6NCW0 530 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 USP17L4A6NCW7 530 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 RAD17O75943 681 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 MAP4K4O95819 1239 aaPredicted RBP14.51□□□□□ -0.09
COMMD9-208ENST00000533643 CYP2E1P05181 493 aaPredicted RBP14.51□□□□□ -0.09
COMMD9-208ENST00000533643 CXCL9Q07325 125 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 TTC22Q5TAA0 569 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 USP17L1Q7RTZ2 530 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 FBXW7Q969H0 707 aa14.51□□□□□ -0.09
COMMD9-208ENST00000533643 EDC3Q96F86 508 aaKnown RBP14.51□□□□□ -0.09
COMMD9-208ENST00000533643 SBF1O95248 1867 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 GOLIM4O00461 696 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 PSMD14O00487 310 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 DACT2Q5SW24 774 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 STRIP1Q5VSL9 837 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 TBC1D9Q6ZT07 1266 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 WDR66Q8TBY9 1149 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 MXD3Q9BW11 206 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 PIH1D3Q9NQM4 214 aaKnown RBP14.5□□□□□ -0.09
COMMD9-208ENST00000533643 PAG1Q9NWQ8 432 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 CHD4Q14839 1912 aa14.5□□□□□ -0.09
COMMD9-208ENST00000533643 AKAP11Q9UKA4 1901 aa14.49□□□□□ -0.09
COMMD9-208ENST00000533643 VIL1P09327 827 aaKnown RBP14.49□□□□□ -0.09
COMMD9-208ENST00000533643 GSPT1P15170 499 aaKnown RBP14.49□□□□□ -0.09
COMMD9-208ENST00000533643 EIF6P56537 245 aaKnown RBP14.49□□□□□ -0.09
COMMD9-208ENST00000533643 GRIK5Q16478 980 aa14.49□□□□□ -0.09
COMMD9-208ENST00000533643 CIAPIN1Q6FI81 312 aa14.49□□□□□ -0.09
COMMD9-208ENST00000533643 CERS5Q8N5B7 392 aa14.49□□□□□ -0.09
COMMD9-208ENST00000533643 SCN9AQ15858 1988 aa14.49□□□□□ -0.09
COMMD9-208ENST00000533643 CCDC88AQ3V6T2 1871 aa14.48□□□□□ -0.09
COMMD9-208ENST00000533643 ZNF541Q9H0D2 1346 aa14.48□□□□□ -0.09
COMMD9-208ENST00000533643 SALL1Q9NSC2 1324 aa14.48□□□□□ -0.09
COMMD9-208ENST00000533643 FKBP1AP62942 108 aaKnown RBP14.48□□□□□ -0.09
COMMD9-208ENST00000533643 TNIP1Q15025 636 aa14.48□□□□□ -0.09
COMMD9-208ENST00000533643 MFSD14BQ5SR56 506 aa14.48□□□□□ -0.09
COMMD9-208ENST00000533643 TBC1D22AQ8WUA7 517 aa14.48□□□□□ -0.09
COMMD9-208ENST00000533643 DICER1Q9UPY3 1922 aaKnown RBP14.47□□□□□ -0.09
COMMD9-208ENST00000533643 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
COMMD9-208ENST00000533643 SDSP20132 328 aa14.47□□□□□ -0.09
COMMD9-208ENST00000533643 TTF1Q15361 905 aaPredicted RBP14.47□□□□□ -0.09
COMMD9-208ENST00000533643 RSBN1LQ6PCB5 846 aaPredicted RBP14.47□□□□□ -0.09
COMMD9-208ENST00000533643 ZGPATQ8N5A5 531 aaKnown RBP14.47□□□□□ -0.09
COMMD9-208ENST00000533643 GMLQ99445 158 aa14.47□□□□□ -0.09
COMMD9-208ENST00000533643 ABCF2Q9UG63 623 aa14.47□□□□□ -0.09
COMMD9-208ENST00000533643 LDHBP07195 334 aaKnown RBP14.46□□□□□ -0.09
COMMD9-208ENST00000533643 BMP2KLQ5H9B9 411 aa14.46□□□□□ -0.09
COMMD9-208ENST00000533643 SPTY2D1Q68D10 685 aaPredicted RBP14.46□□□□□ -0.09
COMMD9-208ENST00000533643 KBTBD3Q8NAB2 608 aa14.46□□□□□ -0.09
COMMD9-208ENST00000533643 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
COMMD9-208ENST00000533643 EVI5LQ96CN4 794 aa14.46□□□□□ -0.09
COMMD9-208ENST00000533643 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.09
COMMD9-208ENST00000533643 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
COMMD9-208ENST00000533643 GJA3Q9Y6H8 435 aa14.46□□□□□ -0.09
COMMD9-208ENST00000533643 ZNF646O15015 1829 aaPredicted RBP14.45□□□□□ -0.1
COMMD9-208ENST00000533643 ZC3H4Q9UPT8 1303 aaKnown RBP14.45□□□□□ -0.1
COMMD9-208ENST00000533643 IDH1O75874 414 aaKnown RBP14.45□□□□□ -0.1
COMMD9-208ENST00000533643 PRDX5P30044 214 aa14.45□□□□□ -0.1
COMMD9-208ENST00000533643 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
COMMD9-208ENST00000533643 CNTROBQ8N137 903 aa14.45□□□□□ -0.1
COMMD9-208ENST00000533643 RAI14Q9P0K7 980 aa14.45□□□□□ -0.1
COMMD9-208ENST00000533643 SUGT1Q9Y2Z0 365 aa14.45□□□□□ -0.1
COMMD9-208ENST00000533643 MYO3BQ8WXR4 1341 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 F8W031 263 aaPredicted RBP14.44□□□□□ -0.1
COMMD9-208ENST00000533643 GMPSP49915 693 aaPredicted RBP14.44□□□□□ -0.1
COMMD9-208ENST00000533643 MECOMQ03112 1051 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 GPC2Q8N158 579 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 AGBL3Q8NEM8 1001 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 ZNF384Q8TF68 577 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 FSD1Q9BTV5 496 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 MYH13Q9UKX3 1938 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 TIAM2Q8IVF5 1701 aa14.44□□□□□ -0.1
COMMD9-208ENST00000533643 PSME4Q14997 1843 aa14.43□□□□□ -0.1
COMMD9-208ENST00000533643 CHGBP05060 677 aa14.43□□□□□ -0.1
COMMD9-208ENST00000533643 RPS12P25398 132 aaKnown RBP14.43□□□□□ -0.1
COMMD9-208ENST00000533643 KIAA0825Q8IV33 1275 aa14.43□□□□□ -0.1
COMMD9-208ENST00000533643 NSUN4Q96CB9 384 aaKnown RBP14.43□□□□□ -0.1
COMMD9-208ENST00000533643 TTF2Q9UNY4 1162 aaKnown RBP14.43□□□□□ -0.1
COMMD9-208ENST00000533643 RNF113AO15541 343 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms