RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 GATA4P43694 442 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 IKBKEQ14164 716 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 VN1R5Q7Z5H4 357 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 CD163Q86VB7 1156 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 TMEM130Q8N3G9 435 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 DDX54Q8TDD1 881 aaKnown RBP4.88□□□□□ -1.63
ATM-220ENST00000533526 EPS8L3Q8TE67 593 aaKnown RBP4.88□□□□□ -1.63
ATM-220ENST00000533526 SRCIN1Q9C0H9 1055 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 SOX17Q9H6I2 414 aaPredicted RBP4.88□□□□□ -1.63
ATM-220ENST00000533526 USP21Q9UK80 565 aa4.88□□□□□ -1.63
ATM-220ENST00000533526 TMEM238LA0A1B0GVL6 79 aa4.87□□□□□ -1.63
ATM-220ENST00000533526 ITPKAP23677 461 aa4.87□□□□□ -1.63
ATM-220ENST00000533526 CDC25BP30305 580 aa4.87□□□□□ -1.63
ATM-220ENST00000533526 C19orf57Q0VDD7 668 aa4.87□□□□□ -1.63
ATM-220ENST00000533526 ADGRE1Q14246 886 aa4.87□□□□□ -1.63
ATM-220ENST00000533526 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATM-220ENST00000533526 EAPPQ56P03 285 aaPredicted RBP4.87□□□□□ -1.63
ATM-220ENST00000533526 PRPF40BQ6NWY9 871 aaKnown RBP4.87□□□□□ -1.63
ATM-220ENST00000533526 ADAMTSL4Q6UY14 1074 aa4.87□□□□□ -1.63
ATM-220ENST00000533526 CLEC4MQ9H2X3 399 aaPredicted RBP4.87□□□□□ -1.63
ATM-220ENST00000533526 SOX1O00570 391 aaPredicted RBP4.86□□□□□ -1.63
ATM-220ENST00000533526 LDHBP07195 334 aaKnown RBP4.86□□□□□ -1.63
ATM-220ENST00000533526 ESRRAP11474 423 aaPredicted RBP4.86□□□□□ -1.63
ATM-220ENST00000533526 CHRNA4P43681 627 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 GRIA4P48058 902 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 GRM2Q14416 872 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 RPS26P11Q5JNZ5 115 aaPredicted RBP4.86□□□□□ -1.63
ATM-220ENST00000533526 GPAT2Q6NUI2 795 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 TXNDC11Q6PKC3 985 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 SHISA2Q6UWI4 295 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 DNAJC14Q6Y2X3 702 aaPredicted RBP4.86□□□□□ -1.63
ATM-220ENST00000533526 TXNRD3Q86VQ6 643 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 GALNT11Q8NCW6 608 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 SLC7A3Q8WY07 619 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 KLHDC7BQ96G42 594 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 BCO2Q9BYV7 579 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 SPG7Q9UQ90 795 aa4.86□□□□□ -1.63
ATM-220ENST00000533526 METTL12A8MUP2 240 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 PRPF40AO75400 957 aaKnown RBP4.85□□□□□ -1.63
ATM-220ENST00000533526 ITGB2P05107 769 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 P4HBP07237 508 aaKnown RBP4.85□□□□□ -1.63
ATM-220ENST00000533526 PCDH1Q08174 1060 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 MBTPS1Q14703 1052 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 DUOXA2Q1HG44 320 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 SPRED3Q2MJR0 410 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 TMCO4Q5TGY1 634 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 WFDC12Q8WWY7 111 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 SPOCK3Q9BQ16 436 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 CARD10Q9BWT7 1032 aa4.85□□□□□ -1.63
ATM-220ENST00000533526 TM4SF5O14894 197 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 CYP11A1P05108 521 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 ITGAEP38570 1179 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 NXPE4Q6UWF7 544 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 DTHD1Q6ZMT9 781 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 GLIS3Q8NEA6 775 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 ZNF576Q9H609 170 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 AKTIPQ9H8T0 292 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 ABCB6Q9NP58 842 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 WWC3Q9ULE0 1092 aa4.84□□□□□ -1.63
ATM-220ENST00000533526 MEGF11A6BM72 1044 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 F8W735 103 aaPredicted RBP4.83□□□□□ -1.64
ATM-220ENST00000533526 B3GALT4O96024 378 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 GSTT1P30711 240 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 IREB2P48200 963 aaKnown RBP4.83□□□□□ -1.64
ATM-220ENST00000533526 FCGRTP55899 365 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 GSTM4Q03013 218 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 ZNF423Q2M1K9 1284 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 FOXD4L6Q3SYB3 417 aaPredicted RBP4.83□□□□□ -1.64
ATM-220ENST00000533526 HP1BP3Q5SSJ5 553 aaPredicted RBP4.83□□□□□ -1.64
ATM-220ENST00000533526 PI16Q6UXB8 463 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 FOXD4L3Q6VB84 417 aaPredicted RBP4.83□□□□□ -1.64
ATM-220ENST00000533526 NPAS4Q8IUM7 802 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 FAM8A1Q9UBU6 413 aa4.83□□□□□ -1.64
ATM-220ENST00000533526 DDX3YO15523 660 aaKnown RBP4.82□□□□□ -1.64
ATM-220ENST00000533526 PROCP04070 461 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 GNA15P30679 374 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 HNRNPUQ00839 825 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATM-220ENST00000533526 XPCQ01831 940 aaPredicted RBP4.82□□□□□ -1.64
ATM-220ENST00000533526 PPP2R3AQ06190 1150 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 EXOSC6Q5RKV6 272 aaKnown RBP4.82□□□□□ -1.64
ATM-220ENST00000533526 ACAD11Q709F0 780 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.82□□□□□ -1.64
ATM-220ENST00000533526 ANKRD24Q8TF21 1146 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 CEP41Q9BYV8 373 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 RNF208Q9H0X6 261 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 BCL11AQ9H165 835 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 C12orf49Q9H741 205 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 KCNK4Q9NYG8 393 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 AKAP2Q9Y2D5 859 aa4.82□□□□□ -1.64
ATM-220ENST00000533526 ADAM11O75078 769 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 EIF4BP23588 611 aaKnown RBP4.81□□□□□ -1.64
ATM-220ENST00000533526 NOS3P29474 1203 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 NLRP12P59046 1061 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 AP3B2Q13367 1082 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 ZNF326Q5BKZ1 582 aaKnown RBP4.81□□□□□ -1.64
ATM-220ENST00000533526 FOXD4L4Q8WXT5 416 aaPredicted RBP4.81□□□□□ -1.64
ATM-220ENST00000533526 DUSP9Q99956 384 aaKnown RBP4.81□□□□□ -1.64
ATM-220ENST00000533526 RUSC1Q9BVN2 902 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 OSBPL7Q9BZF2 842 aa4.81□□□□□ -1.64
ATM-220ENST00000533526 CEP44Q9C0F1 390 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms