RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
RAD50-209ENST00000533482 MADDQ8WXG6 1647 aa14.29□□□□□ -0.12
RAD50-209ENST00000533482 ERVV-2B6SEH9 535 aa14.29□□□□□ -0.12
RAD50-209ENST00000533482 UBASH3AP57075 661 aa14.29□□□□□ -0.12
RAD50-209ENST00000533482 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
RAD50-209ENST00000533482 CROCC2H7BZ55 1655 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 CYP27B1O15528 508 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 TSPY3P0CV98 308 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 TSPY8P0CW00 308 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 KRT23Q9C075 422 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
RAD50-209ENST00000533482 DBNLQ9UJU6 430 aaKnown RBP14.28□□□□□ -0.12
RAD50-209ENST00000533482 ALKQ9UM73 1620 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 IDEP14735 1019 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 LIG1P18858 919 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 MTMR6Q9Y217 621 aa14.28□□□□□ -0.12
RAD50-209ENST00000533482 ATP5JP18859 108 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 ENOX2Q16206 610 aaKnown RBP14.27□□□□□ -0.12
RAD50-209ENST00000533482 RUFY1Q96T51 708 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 CEP152O94986 1710 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 hCG_1642624A0A1W2PR95 340 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 PUM3Q15397 648 aaKnown RBP14.27□□□□□ -0.12
RAD50-209ENST00000533482 CEP135Q66GS9 1140 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 HELLSQ9NRZ9 838 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 KDRP35968 1356 aa14.27□□□□□ -0.12
RAD50-209ENST00000533482 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.13
RAD50-209ENST00000533482 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 PI16Q6UXB8 463 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 ABCA6Q8N139 1617 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 APPBP2Q92624 585 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 ZC3H12CQ9C0D7 883 aaKnown RBP14.27□□□□□ -0.13
RAD50-209ENST00000533482 CAVIN2O95810 425 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 KIF4BQ2VIQ3 1234 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 SPTY2D1Q68D10 685 aaPredicted RBP14.27□□□□□ -0.13
RAD50-209ENST00000533482 PHKBQ93100 1093 aa14.27□□□□□ -0.13
RAD50-209ENST00000533482 ERICH4A6NGS2 130 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 ADORA1P30542 326 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 GSDMDP57764 484 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 SPECC1Q5M775 1068 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 ZNF589Q86UQ0 364 aaPredicted RBP14.26□□□□□ -0.13
RAD50-209ENST00000533482 GREM2Q9H772 168 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
RAD50-209ENST00000533482 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 CDK12Q9NYV4 1490 aaPredicted RBP14.26□□□□□ -0.13
RAD50-209ENST00000533482 FSD2A1L4K1 749 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 STX17P56962 302 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 IFNKQ9P0W0 207 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 ZNF532Q9HCE3 1301 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 KIF5BP33176 963 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 UBA7P41226 1012 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 ZFYVE27Q5T4F4 411 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 DHX58Q96C10 678 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 UBA5Q9GZZ9 404 aa14.26□□□□□ -0.13
RAD50-209ENST00000533482 HS1BP3Q53T59 392 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 BRINP3Q76B58 766 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 CNBD1Q8NA66 436 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 TM6SF1Q9BZW5 370 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 CNNM2Q9H8M5 875 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
RAD50-209ENST00000533482 ZSCAN12O43309 604 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
RAD50-209ENST00000533482 TTC6Q86TZ1 520 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 TSC1Q92574 1164 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 LARGE1O95461 756 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 DNA2P51530 1060 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 KIAA1328Q86T90 577 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 NUP88Q99567 741 aaPredicted RBP14.25□□□□□ -0.13
RAD50-209ENST00000533482 E7EWF7 191 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 NEMFO60524 1076 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 GNG11P61952 73 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 CBX8Q9HC52 389 aa14.25□□□□□ -0.13
RAD50-209ENST00000533482 PTCH1Q13635 1447 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 GYG1P46976 350 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 PRIMPOLQ96LW4 560 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 AATFQ9NY61 560 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAD50-209ENST00000533482 ABCA9Q8IUA7 1624 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 SLFNL1Q499Z3 407 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 DNAI1Q9UI46 699 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 USP21Q9UK80 565 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 LDHBP07195 334 aaKnown RBP14.24□□□□□ -0.13
RAD50-209ENST00000533482 FAM193AP78312 1265 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 EPHA10Q5JZY3 1008 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 AXDND1Q5T1B0 1012 aaPredicted RBP14.24□□□□□ -0.13
RAD50-209ENST00000533482 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
RAD50-209ENST00000533482 KIF2AO00139 706 aaPredicted RBP14.23□□□□□ -0.13
RAD50-209ENST00000533482 SNAP23O00161 211 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 SASH1O94885 1247 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 BCAMP50895 628 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
RAD50-209ENST00000533482 SLF2Q8IX21 1173 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 LPIN2Q92539 896 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 ACBD3Q9H3P7 528 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
RAD50-209ENST00000533482 TULP4Q9NRJ4 1543 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms