RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 GUCY1B3Q02153 619 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 TNMDQ9H2S6 317 aa18.04■□□□□ 0.48
CACNA1E-208ENST00000533229 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 PRC1O43663 620 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 TYRO3Q06418 890 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 SUSD4Q5VX71 490 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 BICD2Q8TD16 824 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 ZNF830Q96NB3 372 aaPredicted RBP18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 NBPF3Q9H094 633 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 CFAP45Q9UL16 551 aa18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
CACNA1E-208ENST00000533229 PLCB2Q00722 1185 aa18.02■□□□□ 0.48
CACNA1E-208ENST00000533229 RBM43Q6ZSC3 357 aaKnown RBP18.02■□□□□ 0.48
CACNA1E-208ENST00000533229 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.48
CACNA1E-208ENST00000533229 FAM177BA6PVY3 158 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 ZNF213O14771 459 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 IDH1O75874 414 aaKnown RBP18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 RAB11FIP4Q86YS3 637 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 USP28Q96RU2 1077 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 CLSTN2Q9H4D0 955 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 DDX19AQ9NUU7 478 aaKnown RBP18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 CARMIL3Q8ND23 1372 aa18.02■□□□□ 0.47
CACNA1E-208ENST00000533229 FGFR2P21802 821 aa18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 RCOR1Q9UKL0 485 aa18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 A0A0G2JS52 829 aa18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 ARID4AP29374 1257 aaPredicted RBP18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 OTUD7BQ6GQQ9 843 aa18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
CACNA1E-208ENST00000533229 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
CACNA1E-208ENST00000533229 KLF18A0A0U1RQI7 1052 aa18■□□□□ 0.47
CACNA1E-208ENST00000533229 ADAMTS2O95450 1211 aa18■□□□□ 0.47
CACNA1E-208ENST00000533229 FAM200AQ8TCP9 573 aa18■□□□□ 0.47
CACNA1E-208ENST00000533229 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
CACNA1E-208ENST00000533229 TCRBV5S4A2TA0A5A2 114 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 TTF1Q15361 905 aaPredicted RBP17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 LUZP1Q86V48 1076 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 TBC1D10CQ8IV04 446 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 LPIN2Q92539 896 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 TTC12Q9H892 705 aaPredicted RBP17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 PDE6AP16499 860 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 DDB1Q16531 1140 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 ANO6Q4KMQ2 910 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 ZSCAN25Q6NSZ9 544 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 KAT6BQ8WYB5 2073 aa17.99■□□□□ 0.47
CACNA1E-208ENST00000533229 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 ITPK1Q13572 414 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 RALYLQ86SE5 291 aaKnown RBP17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 GOLPH3LQ9H4A5 285 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 GJB4Q9NTQ9 266 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 AKAP11Q9UKA4 1901 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 GOLGA8BA8MQT2 603 aa17.98■□□□□ 0.47
CACNA1E-208ENST00000533229 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 APPP05067 770 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 CYB5R4Q7L1T6 521 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 CBX8Q9HC52 389 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 ATRNO75882 1429 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 PLCH1Q4KWH8 1693 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 NUP98P52948 1817 aa17.97■□□□□ 0.47
CACNA1E-208ENST00000533229 LOC102724428A0A0B4J2F2 783 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 UQCRFS1P1P0C7P4 283 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 SIK1P57059 783 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 SNW1Q13573 536 aaKnown RBP17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 RASGRF1Q13972 1273 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 ANKRD36CQ5JPF3 1778 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 SPATA5Q8NB90 893 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 AK7Q96M32 723 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 STRBPQ96SI9 672 aaKnown RBP17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 R3HCC1Q9Y3T6 440 aaKnown RBP17.96■□□□□ 0.47
CACNA1E-208ENST00000533229 SENP2Q9HC62 589 aa17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 FBXO18Q8NFZ0 1043 aa17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 CHMP4CQ96CF2 233 aa17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 MPHOSPH8Q99549 860 aa17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 ORC3Q9UBD5 711 aaPredicted RBP17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 LRP5O75197 1615 aa17.95■□□□□ 0.46
CACNA1E-208ENST00000533229 DOT1LQ8TEK3 1739 aa17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 POLR3DP05423 398 aaPredicted RBP17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
CACNA1E-208ENST00000533229 ENGASEQ8NFI3 743 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms