RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 A0A0G2JS52 829 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 GOLGA8BA8MQT2 603 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 KIF28PB7ZC32 967 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 RIOK3O14730 519 aaKnown RBP17.44■□□□□ 0.38
SSH3-210ENST00000532881 GPAA1O43292 621 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 NAA16Q6N069 864 aaPredicted RBP17.44■□□□□ 0.38
SSH3-210ENST00000532881 LDHAL6AQ6ZMR3 332 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 NUP188Q5SRE5 1749 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 BIN1O00499 593 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 ITGA6P23229 1130 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 TDRD7Q8NHU6 1098 aaKnown RBP17.44■□□□□ 0.38
SSH3-210ENST00000532881 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
SSH3-210ENST00000532881 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
SSH3-210ENST00000532881 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 IDH1O75874 414 aaKnown RBP17.43■□□□□ 0.38
SSH3-210ENST00000532881 CIAO1O76071 339 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 APPP05067 770 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 NDUFA8P51970 172 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 SLC4A9Q96Q91 983 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 MYL10Q9BUA6 226 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
SSH3-210ENST00000532881 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
SSH3-210ENST00000532881 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
SSH3-210ENST00000532881 ENGASEQ8NFI3 743 aa17.43■□□□□ 0.38
SSH3-210ENST00000532881 GOLGA6L6A8MZA4 724 aa17.42■□□□□ 0.38
SSH3-210ENST00000532881 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
SSH3-210ENST00000532881 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
SSH3-210ENST00000532881 ZNF274Q96GC6 653 aaPredicted RBP17.42■□□□□ 0.38
SSH3-210ENST00000532881 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
SSH3-210ENST00000532881 NAA30Q147X3 362 aaPredicted RBP17.42■□□□□ 0.38
SSH3-210ENST00000532881 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
SSH3-210ENST00000532881 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
SSH3-210ENST00000532881 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
SSH3-210ENST00000532881 ORC3Q9UBD5 711 aaPredicted RBP17.42■□□□□ 0.38
SSH3-210ENST00000532881 USP27XA6NNY8 438 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
SSH3-210ENST00000532881 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
SSH3-210ENST00000532881 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
SSH3-210ENST00000532881 CYB5R4Q7L1T6 521 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 MB21D2Q8IYB1 491 aaPredicted RBP17.41■□□□□ 0.38
SSH3-210ENST00000532881 TTLL11Q8NHH1 800 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 PHKBQ93100 1093 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 ZNF213O14771 459 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 PHKA1P46020 1223 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 KIF6Q6ZMV9 814 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 DHX40Q8IX18 779 aaKnown RBP17.41■□□□□ 0.38
SSH3-210ENST00000532881 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 C8orf76Q96K31 380 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
SSH3-210ENST00000532881 ZBTB38Q8NAP3 1195 aaPredicted RBP17.4■□□□□ 0.38
SSH3-210ENST00000532881 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
SSH3-210ENST00000532881 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
SSH3-210ENST00000532881 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
SSH3-210ENST00000532881 APPBP2Q92624 585 aa17.4■□□□□ 0.38
SSH3-210ENST00000532881 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
SSH3-210ENST00000532881 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
SSH3-210ENST00000532881 PCCAP05165 728 aaPredicted RBP17.39■□□□□ 0.38
SSH3-210ENST00000532881 FAM160A1Q05DH4 1040 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.38
SSH3-210ENST00000532881 PTPN21Q16825 1174 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 GLIPR1L2Q4G1C9 344 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.38
SSH3-210ENST00000532881 NLRP10Q86W26 655 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 ZMYND15Q9H091 742 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 AKAP2Q9Y2D5 859 aa17.39■□□□□ 0.38
SSH3-210ENST00000532881 BECN2A8MW95 431 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 B4E1Z4 1266 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 CPLX1O14810 134 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 CSF1RP07333 972 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 STK38Q15208 465 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 DPCR1Q3MIW9 517 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 LINC00301Q8NCQ3 95 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 PRIMPOLQ96LW4 560 aa17.39■□□□□ 0.37
SSH3-210ENST00000532881 ZNF396Q96N95 335 aaPredicted RBP17.39■□□□□ 0.37
SSH3-210ENST00000532881 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
SSH3-210ENST00000532881 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
SSH3-210ENST00000532881 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
SSH3-210ENST00000532881 ZNF592Q92610 1267 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 KIF3AQ9Y496 699 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
SSH3-210ENST00000532881 CDC27P30260 824 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 STX1AQ16623 288 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 MICU3Q86XE3 530 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 TRMT1Q9NXH9 659 aaKnown RBP17.38■□□□□ 0.37
SSH3-210ENST00000532881 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
SSH3-210ENST00000532881 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
SSH3-210ENST00000532881 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
SSH3-210ENST00000532881 ZNF532Q9HCE3 1301 aa17.37■□□□□ 0.37
SSH3-210ENST00000532881 GIGYF2Q6Y7W6 1299 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms