RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 GPAA1O43292 621 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 RXRAP19793 462 aa17.57■□□□□ 0.4
PCDHA3-202ENST00000532566 RTL9Q8NET4 1388 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 PTCH1Q13635 1447 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 EDC3Q96F86 508 aaKnown RBP17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 IDEP14735 1019 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 ST5P78524 1137 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 ADGRB3O60242 1522 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 ABCA6Q8N139 1617 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 KIF20AO95235 890 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 CACNA2D4Q7Z3S7 1137 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 PAXBP1Q9Y5B6 917 aa17.56■□□□□ 0.4
PCDHA3-202ENST00000532566 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 AFMP43652 599 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 MTIF2P46199 727 aaKnown RBP17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 TMEM87BQ96K49 555 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 HLA-DOAP06340 250 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 PRKCSHP14314 528 aaPredicted RBP17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 LMOD1P29536 600 aaPredicted RBP17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 LEKR1Q6ZMV7 388 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 FAM160A1Q05DH4 1040 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 LUZP1Q86V48 1076 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
PCDHA3-202ENST00000532566 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 B4E1Z4 1266 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 N4BP3O15049 544 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 RMND1Q9NWS8 449 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 SLAIN2Q9P270 581 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 ANGEL1Q9UNK9 670 aaKnown RBP17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 PTH1RQ03431 593 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 CGNQ9P2M7 1197 aaKnown RBP17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 A0A0D9SFI3 127 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
PCDHA3-202ENST00000532566 PROSER3Q2NL68 480 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 LAMC1P11047 1609 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 CALML3P27482 149 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 DSCC1Q9BVC3 393 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
PCDHA3-202ENST00000532566 SPAG1Q07617 926 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 ME3Q16798 604 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 CUL5Q93034 780 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 TMEM63CQ9P1W3 806 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 A0A1B0GVL5 298 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 DTNBO60941 627 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 ERLIN2O94905 339 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 HSP90AA4PQ58FG1 418 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 LEO1Q8WVC0 666 aaPredicted RBP17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 LPIN2Q92539 896 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 TAF4BQ92750 862 aa17.52■□□□□ 0.4
PCDHA3-202ENST00000532566 ZNF804AQ7Z570 1209 aa17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 COPRSQ9NQ92 184 aa17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 RRAGBQ5VZM2 374 aa17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 CDC37L1Q7L3B6 337 aa17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 UNC5CLQ8IV45 518 aa17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 SEPT11Q9NVA2 429 aaKnown RBP17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.52■□□□□ 0.39
PCDHA3-202ENST00000532566 ALKQ9UM73 1620 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 ZAP70P43403 619 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 TRIM47Q96LD4 638 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 PTGS1P23219 599 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 PKP1Q13835 747 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 TTLL7Q6ZT98 887 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 FAM114A1Q8IWE2 563 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 DHX58Q96C10 678 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 DENND2AQ9ULE3 1009 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 LMTK2Q8IWU2 1503 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 USO1O60763 962 aaKnown RBP17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 STAT6P42226 847 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 GNG11P61952 73 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 CTAGE1Q96RT6 745 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
PCDHA3-202ENST00000532566 TNIP1Q15025 636 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 GOLGA6L10A6NI86 522 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 JAK2O60674 1132 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 KRI1Q8N9T8 703 aaKnown RBP17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 RGS12O14924 1447 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 QRICH2Q9H0J4 1663 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 KRT2P35908 639 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 CCDC102AQ96A19 550 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 CLSTN2Q9H4D0 955 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 NSFL1CQ9UNZ2 370 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms