RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 FGFR2P21802 821 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 GTF2IP78347 998 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 FBXO33Q7Z6M2 555 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 TNNQ9UQP3 1299 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 TRAF5O00463 557 aa11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 ZBTB22O15209 634 aa11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 SRGAP3O43295 1099 aa11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 CELF2O95319 508 aaKnown RBP11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 LBX1P52954 281 aa11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 LPIN2Q92539 896 aa11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 HDAC9Q9UKV0 1011 aa11.3□□□□□ -0.6
NECTIN1-207ENST00000532197 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 EGFRP00533 1210 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 RLBP1P12271 317 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 SLC5A1P13866 664 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 GYG1P46976 350 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 CYP4F22Q6NT55 531 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 VPS37DQ86XT2 251 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 MTMR14Q8NCE2 650 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 GLIS2Q9BZE0 524 aaPredicted RBP11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
NECTIN1-207ENST00000532197 CAPN15O75808 1086 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 FMR1Q06787 632 aaKnown RBP eCLIP11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 KRT26Q7Z3Y9 468 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 CERS5Q8N5B7 392 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 SIL1Q9H173 461 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
NECTIN1-207ENST00000532197 NOGQ13253 232 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 SCARF1Q14162 830 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 POLA2Q14181 598 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 SSH3Q8TE77 659 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 ZBED3Q96IU2 234 aaPredicted RBP11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 MXD3Q9BW11 206 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 GGA3Q9NZ52 723 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.61
NECTIN1-207ENST00000532197 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 WNT10BO00744 389 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 SEMA3EO15041 775 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 HDLBPQ00341 1268 aaKnown RBP11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 MFSD14BQ5SR56 506 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 PANK1Q8TE04 598 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
NECTIN1-207ENST00000532197 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 BCAMP50895 628 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 DLGAP5Q15398 846 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 ANGEL2Q5VTE6 544 aaKnown RBP11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 USP48Q86UV5 1035 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 WDR66Q8TBY9 1149 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 MRIQ9BWK5 157 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 PDS5AQ29RF7 1337 aaKnown RBP11.25□□□□□ -0.61
NECTIN1-207ENST00000532197 PAPPA2Q9BXP8 1791 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 MYO1BO43795 1136 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 FKBP1BP68106 108 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 C2orf69Q8N8R5 385 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 GBA2Q9HCG7 927 aaPredicted RBP11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 GPR108Q9NPR9 543 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 MYH2Q9UKX2 1941 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 MAST3O60307 1309 aa11.24□□□□□ -0.61
NECTIN1-207ENST00000532197 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 AOC2O75106 756 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 HUNKP57058 714 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 TFCP2Q12800 502 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
NECTIN1-207ENST00000532197 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms