RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RASSF7Q02833 373 aa23.15■■□□□ 1.3
SMPD1-205ENST00000531303 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
SMPD1-205ENST00000531303 CNTROBQ8N137 903 aa23.15■■□□□ 1.3
SMPD1-205ENST00000531303 TDRD7Q8NHU6 1098 aaKnown RBP23.15■■□□□ 1.3
SMPD1-205ENST00000531303 COA1Q9GZY4 146 aa23.15■■□□□ 1.3
SMPD1-205ENST00000531303 DENND2AQ9ULE3 1009 aa23.15■■□□□ 1.3
SMPD1-205ENST00000531303 YBX3P16989 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMPD1-205ENST00000531303 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
SMPD1-205ENST00000531303 LARGE2Q8N3Y3 721 aa23.14■■□□□ 1.29
SMPD1-205ENST00000531303 FBXW7Q969H0 707 aa23.14■■□□□ 1.29
SMPD1-205ENST00000531303 COL1A1P02452 1464 aaPredicted RBP23.13■■□□□ 1.29
SMPD1-205ENST00000531303 EVI5LQ96CN4 794 aa23.13■■□□□ 1.29
SMPD1-205ENST00000531303 MYO5AQ9Y4I1 1855 aaKnown RBP23.13■■□□□ 1.29
SMPD1-205ENST00000531303 SEMA3EO15041 775 aa23.12■■□□□ 1.29
SMPD1-205ENST00000531303 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
SMPD1-205ENST00000531303 IL1R1P14778 569 aa23.12■■□□□ 1.29
SMPD1-205ENST00000531303 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
SMPD1-205ENST00000531303 FSD1Q9BTV5 496 aa23.12■■□□□ 1.29
SMPD1-205ENST00000531303 CCDC88AQ3V6T2 1871 aa23.12■■□□□ 1.29
SMPD1-205ENST00000531303 ECE2O60344 883 aa23.11■■□□□ 1.29
SMPD1-205ENST00000531303 GPR162Q16538 588 aa23.11■■□□□ 1.29
SMPD1-205ENST00000531303 PIH1D3Q9NQM4 214 aaKnown RBP23.11■■□□□ 1.29
SMPD1-205ENST00000531303 KCNQ5Q9NR82 932 aa23.11■■□□□ 1.29
SMPD1-205ENST00000531303 ABCF2Q9UG63 623 aa23.11■■□□□ 1.29
SMPD1-205ENST00000531303 GTF2IP78347 998 aa23.1■■□□□ 1.29
SMPD1-205ENST00000531303 TTF1Q15361 905 aaPredicted RBP23.09■■□□□ 1.29
SMPD1-205ENST00000531303 IDH1O75874 414 aaKnown RBP23.08■■□□□ 1.29
SMPD1-205ENST00000531303 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
SMPD1-205ENST00000531303 NIM1KQ8IY84 436 aa23.08■■□□□ 1.29
SMPD1-205ENST00000531303 KBTBD3Q8NAB2 608 aa23.08■■□□□ 1.29
SMPD1-205ENST00000531303 VPS33BQ9H267 617 aa23.08■■□□□ 1.29
SMPD1-205ENST00000531303 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
SMPD1-205ENST00000531303 COL4A5P29400 1685 aa23.08■■□□□ 1.28
SMPD1-205ENST00000531303 SCN9AQ15858 1988 aa23.07■■□□□ 1.28
SMPD1-205ENST00000531303 LTBP3Q9NS15 1303 aa23.07■■□□□ 1.28
SMPD1-205ENST00000531303 PRELPP51888 382 aa23.07■■□□□ 1.28
SMPD1-205ENST00000531303 TTLL5Q6EMB2 1281 aa23.07■■□□□ 1.28
SMPD1-205ENST00000531303 YDJCA8MPS7 323 aa23.06■■□□□ 1.28
SMPD1-205ENST00000531303 CDC45O75419 566 aa23.06■■□□□ 1.28
SMPD1-205ENST00000531303 CHGBP05060 677 aa23.06■■□□□ 1.28
SMPD1-205ENST00000531303 WDR66Q8TBY9 1149 aa23.06■■□□□ 1.28
SMPD1-205ENST00000531303 PDS5AQ29RF7 1337 aaKnown RBP23.06■■□□□ 1.28
SMPD1-205ENST00000531303 MYH7P12883 1935 aa23.06■■□□□ 1.28
SMPD1-205ENST00000531303 JDP2Q8WYK2 163 aa23.05■■□□□ 1.28
SMPD1-205ENST00000531303 MXD3Q9BW11 206 aa23.05■■□□□ 1.28
SMPD1-205ENST00000531303 RAI14Q9P0K7 980 aa23.05■■□□□ 1.28
SMPD1-205ENST00000531303 SLFNL1Q499Z3 407 aa23.05■■□□□ 1.28
SMPD1-205ENST00000531303 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
SMPD1-205ENST00000531303 FAM205AQ6ZU69 1335 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 RAD17O75943 681 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 CHMLP26374 656 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 MAP3K12Q12852 859 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 MFSD14BQ5SR56 506 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 ERICH6Q7L0X2 663 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMPD1-205ENST00000531303 ZNRF3Q9ULT6 936 aa23.04■■□□□ 1.28
SMPD1-205ENST00000531303 SBF1O95248 1867 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 ZBTB22O15209 634 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 GRIK5Q16478 980 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 DOCK2Q92608 1830 aa23.03■■□□□ 1.28
SMPD1-205ENST00000531303 RNF113AO15541 343 aaKnown RBP23.02■■□□□ 1.28
SMPD1-205ENST00000531303 PRDX5P30044 214 aa23.02■■□□□ 1.28
SMPD1-205ENST00000531303 C8orf34Q49A92 452 aa23.02■■□□□ 1.28
SMPD1-205ENST00000531303 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
SMPD1-205ENST00000531303 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
SMPD1-205ENST00000531303 CWC27Q6UX04 472 aaKnown RBP23.02■■□□□ 1.28
SMPD1-205ENST00000531303 ZGPATQ8N5A5 531 aaKnown RBP23.02■■□□□ 1.28
SMPD1-205ENST00000531303 LDHBP07195 334 aaKnown RBP23.01■■□□□ 1.27
SMPD1-205ENST00000531303 LMNB1P20700 586 aa23.01■■□□□ 1.27
SMPD1-205ENST00000531303 NMIQ13287 307 aaPredicted RBP23.01■■□□□ 1.27
SMPD1-205ENST00000531303 SPTY2D1Q68D10 685 aaPredicted RBP23.01■■□□□ 1.27
SMPD1-205ENST00000531303 MAGEB6Q8N7X4 407 aa23.01■■□□□ 1.27
SMPD1-205ENST00000531303 TBC1D22AQ8WUA7 517 aa23.01■■□□□ 1.27
SMPD1-205ENST00000531303 FAM227BQ96M60 508 aa23.01■■□□□ 1.27
SMPD1-205ENST00000531303 SALL1Q9NSC2 1324 aa23.01■■□□□ 1.27
SMPD1-205ENST00000531303 PDE6AP16499 860 aa23■■□□□ 1.27
SMPD1-205ENST00000531303 LRRFIP1Q32MZ4 808 aaKnown RBP23■■□□□ 1.27
SMPD1-205ENST00000531303 STRIP1Q5VSL9 837 aa23■■□□□ 1.27
SMPD1-205ENST00000531303 CERS5Q8N5B7 392 aa23■■□□□ 1.27
SMPD1-205ENST00000531303 F8W031 263 aaPredicted RBP22.99■■□□□ 1.27
SMPD1-205ENST00000531303 HIP1O00291 1037 aa22.99■■□□□ 1.27
SMPD1-205ENST00000531303 DACT2Q5SW24 774 aa22.99■■□□□ 1.27
SMPD1-205ENST00000531303 ZSCAN25Q6NSZ9 544 aa22.99■■□□□ 1.27
SMPD1-205ENST00000531303 DZIP1Q86YF9 867 aaKnown RBP22.99■■□□□ 1.27
SMPD1-205ENST00000531303 DICER1Q9UPY3 1922 aaKnown RBP22.99■■□□□ 1.27
SMPD1-205ENST00000531303 PSMD14O00487 310 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 GRIN3BO60391 1043 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 ADD2P35612 726 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 MECOMQ03112 1051 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 RNF181Q9P0P0 153 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 ZNF532Q9HCE3 1301 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 PSME4Q14997 1843 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 A0A0D9SFI3 127 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 ZFYP08048 801 aaPredicted RBP22.98■■□□□ 1.27
SMPD1-205ENST00000531303 CYP7A1P22680 504 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 CXCL9Q07325 125 aa22.98■■□□□ 1.27
SMPD1-205ENST00000531303 NAA16Q6N069 864 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms