RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 ITGA6P23229 1130 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 CCDC27Q2M243 656 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 OTOP1Q7RTM1 612 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 C8orf58Q8NAV2 365 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 ARMC5Q96C12 935 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 CUL9Q8IWT3 2517 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 IL16Q14005 1332 aa9.52□□□□□ -0.89
NUP98-217ENST00000530345 RANBP2P49792 3224 aaKnown RBP9.51□□□□□ -0.89
NUP98-217ENST00000530345 ANKRD18BA2A2Z9 1011 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
NUP98-217ENST00000530345 WDHD1O75717 1129 aaPredicted RBP9.51□□□□□ -0.89
NUP98-217ENST00000530345 CSF1RP07333 972 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 IL1R1P14778 569 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 GTF2IP78347 998 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 CHRNDQ07001 517 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 GCKRQ14397 625 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 PRAMEF18Q5VWM3 479 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 ANKRD13AQ8IZ07 590 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 LINS1Q8NG48 757 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 CD209Q9NNX6 404 aa9.51□□□□□ -0.89
NUP98-217ENST00000530345 ZCCHC17Q9NP64 241 aaKnown RBP9.51□□□□□ -0.89
NUP98-217ENST00000530345 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
NUP98-217ENST00000530345 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
NUP98-217ENST00000530345 CWF19L2Q2TBE0 894 aaKnown RBP9.5□□□□□ -0.89
NUP98-217ENST00000530345 NBPF11Q86T75 865 aa9.5□□□□□ -0.89
NUP98-217ENST00000530345 TXNRD3Q86VQ6 643 aa9.5□□□□□ -0.89
NUP98-217ENST00000530345 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
NUP98-217ENST00000530345 EFCC1Q9HA90 598 aa9.5□□□□□ -0.89
NUP98-217ENST00000530345 PTPN22Q9Y2R2 807 aa9.5□□□□□ -0.89
NUP98-217ENST00000530345 PTPRFP10586 1907 aa9.5□□□□□ -0.89
NUP98-217ENST00000530345 IRS2Q9Y4H2 1338 aa9.5□□□□□ -0.89
NUP98-217ENST00000530345 IGF2BP3O00425 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
NUP98-217ENST00000530345 GNRH1P01148 92 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 CASP7P55210 303 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 SP3Q02447 781 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 FLIIQ13045 1269 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 IFIT5Q13325 482 aaKnown RBP9.49□□□□□ -0.89
NUP98-217ENST00000530345 TWISTNBQ3B726 338 aaPredicted RBP9.49□□□□□ -0.89
NUP98-217ENST00000530345 HABP4Q5JVS0 413 aaKnown RBP9.49□□□□□ -0.89
NUP98-217ENST00000530345 DNAAF4Q8WXU2 420 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 JARID2Q92833 1246 aaPredicted RBP9.49□□□□□ -0.89
NUP98-217ENST00000530345 HOOK2Q96ED9 719 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 TMEM106CQ9BVX2 250 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 MXD3Q9BW11 206 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 SCAF8Q9UPN6 1271 aaKnown RBP9.49□□□□□ -0.89
NUP98-217ENST00000530345 FAM205AQ6ZU69 1335 aa9.49□□□□□ -0.89
NUP98-217ENST00000530345 DOCK2Q92608 1830 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 NPM3O75607 178 aaKnown RBP9.48□□□□□ -0.89
NUP98-217ENST00000530345 TNNI2P48788 182 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 DDX10Q13206 875 aaKnown RBP9.48□□□□□ -0.89
NUP98-217ENST00000530345 CRHR2Q13324 411 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 FKBP5Q13451 457 aaPredicted RBP9.48□□□□□ -0.89
NUP98-217ENST00000530345 PRKG1Q13976 671 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 R3HDMLQ9H3Y0 253 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 DOCK3Q8IZD9 2030 aa9.48□□□□□ -0.89
NUP98-217ENST00000530345 WTIPA6NIX2 430 aaPredicted RBP9.47□□□□□ -0.89
NUP98-217ENST00000530345 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 KLRK1P26718 216 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 GTF2A2P52657 109 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 PRMT2P55345 433 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 POTEDQ86YR6 584 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 CERS5Q8N5B7 392 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 ZNF333Q96JL9 665 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 CLMNQ96JQ2 1002 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 VEZTQ9HBM0 779 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 ZFYVE28Q9HCC9 887 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 CSADQ9Y600 493 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 RPAP1Q9BWH6 1393 aaPredicted RBP9.47□□□□□ -0.89
NUP98-217ENST00000530345 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
NUP98-217ENST00000530345 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.89
NUP98-217ENST00000530345 POTEFA5A3E0 1075 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.9
NUP98-217ENST00000530345 HDLBPQ00341 1268 aaKnown RBP9.46□□□□□ -0.9
NUP98-217ENST00000530345 UBE4AQ14139 1066 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 RASA3Q14644 834 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 KIF22Q14807 665 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 CCDC57Q2TAC2 916 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 SLC9C1Q4G0N8 1177 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 HELBQ8NG08 1087 aaPredicted RBP9.46□□□□□ -0.9
NUP98-217ENST00000530345 CD99L2Q8TCZ2 262 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 TBC1D22AQ8WUA7 517 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 ZSWIM8A7E2V4 1837 aa9.46□□□□□ -0.9
NUP98-217ENST00000530345 CLRN2A0PK11 232 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 CAPN2P17655 700 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 RBM5P52756 815 aaKnown RBP eCLIP9.45□□□□□ -0.9
NUP98-217ENST00000530345 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
NUP98-217ENST00000530345 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 MFSD14BQ5SR56 506 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 NBPF12Q5TAG4 269 aaPredicted RBP9.45□□□□□ -0.9
NUP98-217ENST00000530345 FKBP1CQ5VVH2 108 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 OPTNQ96CV9 577 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms