RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 BRPF3Q9ULD4 1205 aa6.34□□□□□ -1.39
CTR9-205ENST00000529898 RAXQ9Y2V3 346 aa6.34□□□□□ -1.39
CTR9-205ENST00000529898 H3BRB1 525 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
CTR9-205ENST00000529898 FSTP19883 344 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 ARL4DP49703 201 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 KIAA0319Q5VV43 1072 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 HGSNATQ68CP4 663 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 ANKRD34AQ69YU3 496 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 CCNJLQ8IV13 435 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 GLYCTKQ8IVS8 523 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 UBASH3BQ8TF42 649 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 MYRFLQ96LU7 910 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 TUT1Q9H6E5 874 aaKnown RBP6.33□□□□□ -1.4
CTR9-205ENST00000529898 LATS2Q9NRM7 1088 aa6.33□□□□□ -1.4
CTR9-205ENST00000529898 A0A1W2PP55 124 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 GSC2O15499 205 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
CTR9-205ENST00000529898 HYAL3O43820 417 aaPredicted RBP6.32□□□□□ -1.4
CTR9-205ENST00000529898 NEFLP07196 543 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 ESRRAP11474 423 aaPredicted RBP6.32□□□□□ -1.4
CTR9-205ENST00000529898 PDE3BQ13370 1112 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 IKBKEQ14164 716 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 TCF12Q99081 682 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 RNF208Q9H0X6 261 aa6.32□□□□□ -1.4
CTR9-205ENST00000529898 NDUFB5O43674 189 aa6.31□□□□□ -1.4
CTR9-205ENST00000529898 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
CTR9-205ENST00000529898 NRSN2Q9GZP1 204 aa6.31□□□□□ -1.4
CTR9-205ENST00000529898 SUGCTQ9HAC7 445 aa6.31□□□□□ -1.4
CTR9-205ENST00000529898 STOML1Q9UBI4 398 aa6.31□□□□□ -1.4
CTR9-205ENST00000529898 GNEQ9Y223 722 aaKnown RBP6.31□□□□□ -1.4
CTR9-205ENST00000529898 IGLV1-40P01703 118 aa6.3□□□□□ -1.4
CTR9-205ENST00000529898 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.3□□□□□ -1.4
CTR9-205ENST00000529898 FAM20CQ8IXL6 584 aa6.3□□□□□ -1.4
CTR9-205ENST00000529898 SMG8Q8ND04 991 aaKnown RBP6.3□□□□□ -1.4
CTR9-205ENST00000529898 CCER1Q8TC90 406 aaPredicted RBP6.3□□□□□ -1.4
CTR9-205ENST00000529898 SLC7A3Q8WY07 619 aa6.3□□□□□ -1.4
CTR9-205ENST00000529898 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
CTR9-205ENST00000529898 DNAJC25Q9H1X3 360 aa6.3□□□□□ -1.4
CTR9-205ENST00000529898 HIF3AQ9Y2N7 669 aa6.3□□□□□ -1.4
CTR9-205ENST00000529898 A0A096LPE4 126 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 LOC100289279A0A1B0GTE1 492 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 SCO2A0A1W2PP80 73 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 A0A1W2PPZ6 126 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 TIAF1O95411 115 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 POLR3DP05423 398 aaPredicted RBP6.29□□□□□ -1.4
CTR9-205ENST00000529898 GRIA4P48058 902 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 NLRP12P59046 1061 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
CTR9-205ENST00000529898 ALKBH8Q96BT7 664 aaKnown RBP6.29□□□□□ -1.4
CTR9-205ENST00000529898 ARID3AQ99856 593 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 TIMELESSQ9UNS1 1208 aa6.29□□□□□ -1.4
CTR9-205ENST00000529898 METTL12A8MUP2 240 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 CPNE3O75131 537 aaKnown RBP6.28□□□□□ -1.4
CTR9-205ENST00000529898 DLGAP3O95886 979 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 ITPKAP23677 461 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 PREPP48147 710 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 PTPN12Q05209 780 aaKnown RBP6.28□□□□□ -1.4
CTR9-205ENST00000529898 ZNF423Q2M1K9 1284 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 USPL1Q5W0Q7 1092 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 RNF43Q68DV7 783 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 ASAP3Q8TDY4 903 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 CLEC4MQ9H2X3 399 aaPredicted RBP6.28□□□□□ -1.4
CTR9-205ENST00000529898 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 LIN7BQ9HAP6 207 aa6.28□□□□□ -1.4
CTR9-205ENST00000529898 SOWAHDA6NJG2 315 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 GPR182O15218 404 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 BRD1O95696 1058 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 CD97P48960 835 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 NFIAQ12857 509 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 ORC1Q13415 861 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 EXOSC6Q5RKV6 272 aaKnown RBP6.27□□□□□ -1.41
CTR9-205ENST00000529898 ZDHHC13Q8IUH4 622 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 DMRTB1Q96MA1 342 aa6.27□□□□□ -1.41
CTR9-205ENST00000529898 PCDH1Q08174 1060 aa6.26□□□□□ -1.41
CTR9-205ENST00000529898 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
CTR9-205ENST00000529898 PRPF40BQ6NWY9 871 aaKnown RBP6.26□□□□□ -1.41
CTR9-205ENST00000529898 HMX2A2RU54 273 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 KIAA1324LA8MWY0 1029 aaPredicted RBP6.25□□□□□ -1.41
CTR9-205ENST00000529898 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
CTR9-205ENST00000529898 SART1O43290 800 aaKnown RBP6.25□□□□□ -1.41
CTR9-205ENST00000529898 B3GALT4O96024 378 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 BMP3P12645 472 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 NUTM2GQ5VZR2 741 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 FDX2Q6P4F2 183 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 CCDC74AQ96AQ1 378 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 DBNDD2Q9BQY9 259 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 CYP4F12Q9HCS2 524 aa6.25□□□□□ -1.41
CTR9-205ENST00000529898 PRR19A6NJB7 356 aa6.24□□□□□ -1.41
CTR9-205ENST00000529898 GSTM4Q03013 218 aa6.24□□□□□ -1.41
CTR9-205ENST00000529898 RPS26P11Q5JNZ5 115 aaPredicted RBP6.24□□□□□ -1.41
CTR9-205ENST00000529898 BEND4Q6ZU67 534 aa6.24□□□□□ -1.41
CTR9-205ENST00000529898 CSRNP1Q96S65 589 aa6.24□□□□□ -1.41
CTR9-205ENST00000529898 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
CTR9-205ENST00000529898 NIF3L1Q9GZT8 377 aa6.24□□□□□ -1.41
CTR9-205ENST00000529898 ZNF576Q9H609 170 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms