RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 PABPN1LA6NDY0 278 aaKnown RBP9.64□□□□□ -0.87
CTNND1-221ENST00000529873 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 PHACTR2O75167 634 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 SPECC1Q5M775 1068 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 PLXNC1O60486 1568 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 B4DLN1 442 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 ACTN2P35609 894 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 MRPL12P52815 198 aaKnown RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 LMBR1Q8WVP7 490 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 DHX58Q96C10 678 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 COMMD10Q9Y6G5 202 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 FAM13AO94988 1023 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 EYA3Q99504 573 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 IKBKGQ9Y6K9 419 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 SPDYE3A6NKU9 549 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 SPTLC2O15270 562 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 FERP16591 822 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-221ENST00000529873 TPTE2Q6XPS3 522 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 BRAPQ7Z569 592 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 AKR1B10O60218 316 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 TUBB4AP04350 444 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
CTNND1-221ENST00000529873 UHRF1BP1Q6BDS2 1440 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 TRIM75PA6NK02 468 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-221ENST00000529873 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 DENND2AQ9ULE3 1009 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 COL17A1Q9UMD9 1497 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-221ENST00000529873 CTAGE15A4D2H0 777 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 CTAGE8P0CG41 777 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 PPM1FP49593 454 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-221ENST00000529873 AK2P54819 239 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 CTAGE6Q86UF2 777 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 CTAGE4Q8IX94 777 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 WDR66Q8TBY9 1149 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 CFAP74Q9C0B2 1584 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 DCTPP1Q9H773 170 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
CTNND1-221ENST00000529873 KRT83P78385 493 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
CTNND1-221ENST00000529873 SPAG5Q96R06 1193 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
CTNND1-221ENST00000529873 CPSF2Q9P2I0 782 aaKnown RBP9.62□□□□□ -0.87
CTNND1-221ENST00000529873 DYNC1I1O14576 645 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 TACC1O75410 805 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 IP6K1Q92551 441 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 TSGA10Q9BZW7 698 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 NSRP1Q9H0G5 558 aaKnown RBP9.61□□□□□ -0.87
CTNND1-221ENST00000529873 VAMP4O75379 141 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 PARP1P09874 1014 aaKnown RBP9.61□□□□□ -0.87
CTNND1-221ENST00000529873 MCM7P33993 719 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 MNAT1P51948 309 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 C8orf34Q49A92 452 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 STMN4Q9H169 189 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-221ENST00000529873 DNAJC25Q9H1X3 360 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 EDC4Q6P2E9 1401 aaKnown RBP9.61□□□□□ -0.87
CTNND1-221ENST00000529873 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
CTNND1-221ENST00000529873 A0A1W2PRG0 241 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 PTPDC1A2A3K4 754 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 SYT1P21579 422 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 GNA11P29992 359 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
CTNND1-221ENST00000529873 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 CTAGE9A4FU28 777 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 VEZTQ9HBM0 779 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 ABCA5Q8WWZ7 1642 aa9.61□□□□□ -0.87
CTNND1-221ENST00000529873 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 ATP7AQ04656 1500 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 SBNO1A3KN83 1393 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 SKILP12757 684 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 UBXN1Q04323 297 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 PLS1Q14651 629 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
CTNND1-221ENST00000529873 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 NCBP1Q09161 790 aaKnown RBP9.6□□□□□ -0.87
CTNND1-221ENST00000529873 ATL3Q6DD88 541 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 PPP1R14CQ8TAE6 165 aa9.6□□□□□ -0.87
CTNND1-221ENST00000529873 TMEM110-MUSTN1A8MSY1 372 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms