RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ITGB7P26010 798 aa8.09□□□□□ -1.11
C11orf88-204ENST00000529661 NOS3P29474 1203 aa8.09□□□□□ -1.11
C11orf88-204ENST00000529661 IKBKEQ14164 716 aa8.09□□□□□ -1.11
C11orf88-204ENST00000529661 VN1R5Q7Z5H4 357 aa8.09□□□□□ -1.11
C11orf88-204ENST00000529661 GZF1Q9H116 711 aaPredicted RBP8.09□□□□□ -1.11
C11orf88-204ENST00000529661 AKTIPQ9H8T0 292 aa8.09□□□□□ -1.11
C11orf88-204ENST00000529661 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
C11orf88-204ENST00000529661 WISP1O95388 367 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 ARL4DP49703 201 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 NLRP12P59046 1061 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 PLCB3Q01970 1234 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 RSPO4Q2I0M5 234 aaPredicted RBP8.08□□□□□ -1.12
C11orf88-204ENST00000529661 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 HGSNATQ68CP4 663 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 ACAD11Q709F0 780 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 CCNJLQ8IV13 435 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 ZSCAN29Q8IWY8 852 aaPredicted RBP8.08□□□□□ -1.12
C11orf88-204ENST00000529661 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
C11orf88-204ENST00000529661 WNT8BQ93098 351 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 TCF12Q99081 682 aa8.08□□□□□ -1.12
C11orf88-204ENST00000529661 F8W735 103 aaPredicted RBP8.07□□□□□ -1.12
C11orf88-204ENST00000529661 TREHO43280 583 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 ADAM11O75078 769 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 GRIA4P48058 902 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 C19orf57Q0VDD7 668 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 DUOXA2Q1HG44 320 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 KIAA0319Q5VV43 1072 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 EPS8L3Q8TE67 593 aaKnown RBP8.07□□□□□ -1.12
C11orf88-204ENST00000529661 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
C11orf88-204ENST00000529661 TP53INP1Q96A56 240 aa8.07□□□□□ -1.12
C11orf88-204ENST00000529661 A0A096LPE4 126 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 PNMA6FA0A0J9YX94 578 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 A0A1W2PPZ6 126 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 SOX1O00570 391 aaPredicted RBP8.06□□□□□ -1.12
C11orf88-204ENST00000529661 GLB1P16278 677 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 DSC3Q14574 896 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 NKAPLQ5M9Q1 402 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 TMEM130Q8N3G9 435 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 UBASH3BQ8TF42 649 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 ASB16Q96NS5 453 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
C11orf88-204ENST00000529661 TM4SF5O14894 197 aa8.05□□□□□ -1.12
C11orf88-204ENST00000529661 MAPK8P45983 427 aa8.05□□□□□ -1.12
C11orf88-204ENST00000529661 PI16Q6UXB8 463 aa8.05□□□□□ -1.12
C11orf88-204ENST00000529661 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.05□□□□□ -1.12
C11orf88-204ENST00000529661 MEGF10Q96KG7 1140 aa8.05□□□□□ -1.12
C11orf88-204ENST00000529661 SEMA6BQ9H3T3 888 aa8.05□□□□□ -1.12
C11orf88-204ENST00000529661 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
C11orf88-204ENST00000529661 ESRRAP11474 423 aaPredicted RBP8.04□□□□□ -1.12
C11orf88-204ENST00000529661 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
C11orf88-204ENST00000529661 SND1Q7KZF4 910 aaKnown RBP eCLIP8.04□□□□□ -1.12
C11orf88-204ENST00000529661 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
C11orf88-204ENST00000529661 GSTM4Q03013 218 aa8.03□□□□□ -1.12
C11orf88-204ENST00000529661 ENOX2Q16206 610 aaKnown RBP8.03□□□□□ -1.12
C11orf88-204ENST00000529661 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
C11orf88-204ENST00000529661 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
C11orf88-204ENST00000529661 CLEC4MQ9H2X3 399 aaPredicted RBP8.03□□□□□ -1.12
C11orf88-204ENST00000529661 DYRK3O43781 588 aa8.02□□□□□ -1.13
C11orf88-204ENST00000529661 GRM2Q14416 872 aa8.02□□□□□ -1.13
C11orf88-204ENST00000529661 ABCB6Q9NP58 842 aa8.02□□□□□ -1.13
C11orf88-204ENST00000529661 TRAK1Q9UPV9 953 aa8.02□□□□□ -1.13
C11orf88-204ENST00000529661 FMR1Q06787 632 aaKnown RBP eCLIP8.01□□□□□ -1.13
C11orf88-204ENST00000529661 ZNF423Q2M1K9 1284 aa8.01□□□□□ -1.13
C11orf88-204ENST00000529661 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.01□□□□□ -1.13
C11orf88-204ENST00000529661 TMCO4Q5TGY1 634 aa8.01□□□□□ -1.13
C11orf88-204ENST00000529661 SETDB2Q96T68 719 aa8.01□□□□□ -1.13
C11orf88-204ENST00000529661 SOX17Q9H6I2 414 aaPredicted RBP8.01□□□□□ -1.13
C11orf88-204ENST00000529661 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
C11orf88-204ENST00000529661 ITPKAP23677 461 aa8□□□□□ -1.13
C11orf88-204ENST00000529661 PRPF40BQ6NWY9 871 aaKnown RBP8□□□□□ -1.13
C11orf88-204ENST00000529661 Q6ZS46 218 aa8□□□□□ -1.13
C11orf88-204ENST00000529661 RUSC1Q9BVN2 902 aa8□□□□□ -1.13
C11orf88-204ENST00000529661 ZNF576Q9H609 170 aa8□□□□□ -1.13
C11orf88-204ENST00000529661 FCGRTP55899 365 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 ATP2B2Q01814 1243 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 DTHD1Q6ZMT9 781 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 DZIP1LQ8IYY4 767 aaKnown RBP7.99□□□□□ -1.13
C11orf88-204ENST00000529661 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
C11orf88-204ENST00000529661 BCO2Q9BYV7 579 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 CEP41Q9BYV8 373 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 RNF208Q9H0X6 261 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 PPP4R2Q9NY27 417 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
C11orf88-204ENST00000529661 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
C11orf88-204ENST00000529661 P4HBP07237 508 aaKnown RBP7.98□□□□□ -1.13
C11orf88-204ENST00000529661 H2AFB1P0C5Y9 115 aa7.98□□□□□ -1.13
C11orf88-204ENST00000529661 H2AFB2P0C5Z0 115 aa7.98□□□□□ -1.13
C11orf88-204ENST00000529661 NXPE4Q6UWF7 544 aa7.98□□□□□ -1.13
C11orf88-204ENST00000529661 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
C11orf88-204ENST00000529661 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
C11orf88-204ENST00000529661 B3GALT4O96024 378 aa7.97□□□□□ -1.13
C11orf88-204ENST00000529661 ZNF157P51786 506 aaPredicted RBP7.97□□□□□ -1.13
C11orf88-204ENST00000529661 PTPN12Q05209 780 aaKnown RBP7.97□□□□□ -1.13
C11orf88-204ENST00000529661 FDX2Q6P4F2 183 aa7.97□□□□□ -1.13
C11orf88-204ENST00000529661 DDX54Q8TDD1 881 aaKnown RBP7.97□□□□□ -1.13
C11orf88-204ENST00000529661 FBF1Q8TES7 1133 aa7.97□□□□□ -1.13
C11orf88-204ENST00000529661 ANKRD33BA6NCL7 494 aa7.96□□□□□ -1.14
C11orf88-204ENST00000529661 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
C11orf88-204ENST00000529661 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
C11orf88-204ENST00000529661 DLGAP3O95886 979 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms