RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SOX13Q9UN79 622 aa8.15□□□□□ -1.1
CTR9-204ENST00000529355 A0A096LPE4 126 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 A0A1W2PPZ6 126 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
CTR9-204ENST00000529355 ERCC3P19447 782 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 CDC27P30260 824 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 FCGRTP55899 365 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 ATP2B2Q01814 1243 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 WFDC8Q8IUA0 241 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
CTR9-204ENST00000529355 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
CTR9-204ENST00000529355 GNB5O14775 395 aa8.13□□□□□ -1.11
CTR9-204ENST00000529355 TM4SF5O14894 197 aa8.13□□□□□ -1.11
CTR9-204ENST00000529355 PTPRAP18433 802 aa8.13□□□□□ -1.11
CTR9-204ENST00000529355 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
CTR9-204ENST00000529355 GALNT11Q8NCW6 608 aa8.13□□□□□ -1.11
CTR9-204ENST00000529355 A0A0A0MRY4 1105 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 SOX1O00570 391 aaPredicted RBP8.12□□□□□ -1.11
CTR9-204ENST00000529355 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 SETDB1Q15047 1291 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 FBF1Q8TES7 1133 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 BSNDQ8WZ55 320 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 PPME1Q9Y570 386 aa8.12□□□□□ -1.11
CTR9-204ENST00000529355 UNCXA6NJT0 531 aa8.11□□□□□ -1.11
CTR9-204ENST00000529355 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
CTR9-204ENST00000529355 GNA15P30679 374 aa8.11□□□□□ -1.11
CTR9-204ENST00000529355 DAB2P98082 770 aa8.11□□□□□ -1.11
CTR9-204ENST00000529355 GRIK4Q16099 956 aa8.11□□□□□ -1.11
CTR9-204ENST00000529355 PRPF40BQ6NWY9 871 aaKnown RBP8.11□□□□□ -1.11
CTR9-204ENST00000529355 C3orf58Q8NDZ4 430 aa8.11□□□□□ -1.11
CTR9-204ENST00000529355 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
CTR9-204ENST00000529355 CTSHP09668 335 aa8.1□□□□□ -1.11
CTR9-204ENST00000529355 SHISA2Q6UWI4 295 aa8.1□□□□□ -1.11
CTR9-204ENST00000529355 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
CTR9-204ENST00000529355 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
CTR9-204ENST00000529355 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
CTR9-204ENST00000529355 RBM47A0AV96 593 aaKnown RBP8.09□□□□□ -1.11
CTR9-204ENST00000529355 FBXO24O75426 580 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 USP17L7P0C7H9 530 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 ITPKAP23677 461 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 FMR1NBQ8N0W7 255 aaPredicted RBP8.09□□□□□ -1.11
CTR9-204ENST00000529355 KLHDC7BQ96G42 594 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 SPG7Q9UQ90 795 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 AK5Q9Y6K8 562 aa8.09□□□□□ -1.11
CTR9-204ENST00000529355 FSCN2O14926 492 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 FURINP09958 794 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
CTR9-204ENST00000529355 XPCQ01831 940 aaPredicted RBP8.08□□□□□ -1.12
CTR9-204ENST00000529355 PCDH1Q08174 1060 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 PSMD2Q13200 908 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 MEI1Q5TIA1 1274 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 DTHD1Q6ZMT9 781 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
CTR9-204ENST00000529355 KRBA1A5PL33 1030 aa8.07□□□□□ -1.12
CTR9-204ENST00000529355 H3BRJ5 948 aa8.07□□□□□ -1.12
CTR9-204ENST00000529355 ADAM11O75078 769 aa8.07□□□□□ -1.12
CTR9-204ENST00000529355 IKBKEQ14164 716 aa8.07□□□□□ -1.12
CTR9-204ENST00000529355 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
CTR9-204ENST00000529355 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
CTR9-204ENST00000529355 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
CTR9-204ENST00000529355 EIF4BP23588 611 aaKnown RBP8.06□□□□□ -1.12
CTR9-204ENST00000529355 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
CTR9-204ENST00000529355 ZNF326Q5BKZ1 582 aaKnown RBP8.06□□□□□ -1.12
CTR9-204ENST00000529355 LDLRAD1Q5T700 205 aa8.06□□□□□ -1.12
CTR9-204ENST00000529355 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
CTR9-204ENST00000529355 CLEC4MQ9H2X3 399 aaPredicted RBP8.06□□□□□ -1.12
CTR9-204ENST00000529355 DLL1O00548 723 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 WISP1O95388 367 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 ECEL1O95672 775 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 SELPP16109 830 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 TPTE2Q6XPS3 522 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 STK35Q8TDR2 534 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
CTR9-204ENST00000529355 KIAA1522Q9P206 1035 aaPredicted RBP8.05□□□□□ -1.12
CTR9-204ENST00000529355 PAGE1O75459 146 aa8.04□□□□□ -1.12
CTR9-204ENST00000529355 CTSBP07858 339 aa8.04□□□□□ -1.12
CTR9-204ENST00000529355 CABP4P57796 275 aa8.04□□□□□ -1.12
CTR9-204ENST00000529355 NLRP12P59046 1061 aa8.04□□□□□ -1.12
CTR9-204ENST00000529355 MRPL58Q14197 206 aaKnown RBP8.04□□□□□ -1.12
CTR9-204ENST00000529355 FAM8A1Q9UBU6 413 aa8.04□□□□□ -1.12
CTR9-204ENST00000529355 SORBS3O60504 671 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 ALX3O95076 343 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 DLGAP3O95886 979 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 RAC1P63000 192 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 GSTM4Q03013 218 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 CACTIN-AS1Q8N1I8 211 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 UBASH3BQ8TF42 649 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
CTR9-204ENST00000529355 PPP4R2Q9NY27 417 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 VTI1BQ9UEU0 232 aa8.03□□□□□ -1.12
CTR9-204ENST00000529355 GIPC1O14908 333 aa8.02□□□□□ -1.13
CTR9-204ENST00000529355 B3GALT4O96024 378 aa8.02□□□□□ -1.13
CTR9-204ENST00000529355 GSTT1P30711 240 aa8.02□□□□□ -1.13
CTR9-204ENST00000529355 CD68P34810 354 aaPredicted RBP8.02□□□□□ -1.13
CTR9-204ENST00000529355 PIP4K2BP78356 416 aa8.02□□□□□ -1.13
CTR9-204ENST00000529355 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
CTR9-204ENST00000529355 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
CTR9-204ENST00000529355 ALYREFQ86V81 257 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms