RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 FSIP1Q8NA03 581 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 LINC00301Q8NCQ3 95 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 CACTINQ8WUQ7 758 aaKnown RBP9.79□□□□□ -0.84
CSTF3-208ENST00000528865 ANKRD7Q92527 254 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 PCDHA7Q9UN72 937 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 RIPOR2Q9Y4F9 1068 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 SMTNL1A8MU46 457 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 GOLGA6L19H0YKK7 550 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 PRC1O43663 620 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 KINO60870 393 aaKnown RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 ANTXR2P58335 489 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 CHAF1AQ13111 956 aaPredicted RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC144BQ3MJ40 725 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 BRAPQ7Z569 592 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 LRRC8AQ8IWT6 810 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 DRC7Q8IY82 874 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 ZBTB38Q8NAP3 1195 aaPredicted RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 FBXO18Q8NFZ0 1043 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 NCOA7Q8NI08 942 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 KCNG4Q8TDN1 519 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 MRPS27Q92552 414 aaKnown RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 BCL2L12Q9HB09 334 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 NCOA5Q9HCD5 579 aaKnown RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 CLIP2Q9UDT6 1046 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC9Q9Y3X0 531 aaKnown RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 PAXBP1Q9Y5B6 917 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 SOS2Q07890 1332 aaPredicted RBP9.78□□□□□ -0.84
CSTF3-208ENST00000528865 STRCP1A6NGW2 1772 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 MYH15Q9Y2K3 1946 aa9.78□□□□□ -0.84
CSTF3-208ENST00000528865 FAM237AA0A1B0GTK4 181 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 FKBP4Q02790 459 aaKnown RBP eCLIP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 CEBPZQ03701 1054 aaKnown RBP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 LRMPQ12912 555 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 SCARF1Q14162 830 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 UBE3CQ15386 1083 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 ALX1Q15699 326 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 SMAP1Q8IYB5 467 aaPredicted RBP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 C8orf76Q96K31 380 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 TIGD1Q96MW7 591 aa9.77□□□□□ -0.85
CSTF3-208ENST00000528865 FTOQ9C0B1 505 aaKnown RBP eCLIP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 OSBPL5Q9H0X9 879 aaPredicted RBP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 GPHNQ9NQX3 736 aaPredicted RBP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 COL5A2P05997 1499 aaPredicted RBP9.77□□□□□ -0.85
CSTF3-208ENST00000528865 KLF18A0A0U1RQI7 1052 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 ZNF213O14771 459 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 CMA1P23946 247 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 ADD2P35612 726 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 ZAP70P43403 619 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 ME1P48163 572 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 IFIT5Q13325 482 aaKnown RBP9.76□□□□□ -0.85
CSTF3-208ENST00000528865 DHX8Q14562 1220 aaKnown RBP9.76□□□□□ -0.85
CSTF3-208ENST00000528865 WASHC4Q2M389 1173 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 HSP90AB3PQ58FF7 597 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
CSTF3-208ENST00000528865 GORABQ5T7V8 394 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
CSTF3-208ENST00000528865 BRINP3Q76B58 766 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 CHST3Q7LGC8 479 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 CEP57L1Q8IYX8 460 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 ZMYND15Q9H091 742 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 PUS7LQ9H0K6 701 aaKnown RBP9.76□□□□□ -0.85
CSTF3-208ENST00000528865 PRDM11Q9NQV5 511 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 KIAA1468Q9P260 1216 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 IMPACTQ9P2X3 320 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 ORC3Q9UBD5 711 aaPredicted RBP9.76□□□□□ -0.85
CSTF3-208ENST00000528865 NEDD4P46934 1319 aa9.76□□□□□ -0.85
CSTF3-208ENST00000528865 BECN2A8MW95 431 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 SPTLC2O15270 562 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 GPAA1O43292 621 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 TNNT1P13805 278 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 GSDMDP57764 484 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 NLRP12P59046 1061 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 GUCY1B3Q02153 619 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 KIF23Q02241 960 aaPredicted RBP9.75□□□□□ -0.85
CSTF3-208ENST00000528865 SLC39A14Q15043 492 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 STK38Q15208 465 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 TTF1Q15361 905 aaPredicted RBP9.75□□□□□ -0.85
CSTF3-208ENST00000528865 ATP2B3Q16720 1220 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 ANO1Q5XXA6 986 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 KIF6Q6ZMV9 814 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 ELOA2Q8IYF1 753 aaPredicted RBP9.75□□□□□ -0.85
CSTF3-208ENST00000528865 VGLL2Q8N8G2 317 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 TTLL11Q8NHH1 800 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 TSC1Q92574 1164 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.75□□□□□ -0.85
CSTF3-208ENST00000528865 CLIC4Q9Y696 253 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 NWD2Q9ULI1 1742 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 MAP3K15Q6ZN16 1313 aa9.75□□□□□ -0.85
CSTF3-208ENST00000528865 ATRNO75882 1429 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 RIC1Q4ADV7 1423 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 CCDC69A6NI79 296 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 SH2B2O14492 632 aaPredicted RBP9.74□□□□□ -0.85
CSTF3-208ENST00000528865 PPP6R2O75170 966 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 UQCRFS1P1P0C7P4 283 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms