RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 GNA15P30679 374 aa9.97□□□□□ -0.81
PCF11-202ENST00000528336 PSMD2Q13200 908 aa9.97□□□□□ -0.81
PCF11-202ENST00000528336 IKBKEQ14164 716 aa9.97□□□□□ -0.81
PCF11-202ENST00000528336 SETDB1Q15047 1291 aa9.97□□□□□ -0.81
PCF11-202ENST00000528336 ZNF326Q5BKZ1 582 aaKnown RBP9.97□□□□□ -0.81
PCF11-202ENST00000528336 FMR1NBQ8N0W7 255 aaPredicted RBP9.97□□□□□ -0.81
PCF11-202ENST00000528336 RGS22Q8NE09 1264 aa9.97□□□□□ -0.81
PCF11-202ENST00000528336 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
PCF11-202ENST00000528336 GIPC1O14908 333 aa9.96□□□□□ -0.82
PCF11-202ENST00000528336 FSCN2O14926 492 aa9.96□□□□□ -0.82
PCF11-202ENST00000528336 GRIK4Q16099 956 aa9.96□□□□□ -0.82
PCF11-202ENST00000528336 HGSNATQ68CP4 663 aa9.96□□□□□ -0.82
PCF11-202ENST00000528336 FBXO11Q86XK2 927 aa9.96□□□□□ -0.82
PCF11-202ENST00000528336 DTWD1Q8N5C7 304 aa9.96□□□□□ -0.82
PCF11-202ENST00000528336 SOX1O00570 391 aaPredicted RBP9.95□□□□□ -0.82
PCF11-202ENST00000528336 PCDH1Q08174 1060 aa9.95□□□□□ -0.82
PCF11-202ENST00000528336 FRMD6Q96NE9 622 aa9.95□□□□□ -0.82
PCF11-202ENST00000528336 CLEC4MQ9H2X3 399 aaPredicted RBP9.95□□□□□ -0.82
PCF11-202ENST00000528336 C12orf49Q9H741 205 aa9.95□□□□□ -0.82
PCF11-202ENST00000528336 SPATA31C1P0DKV0 1188 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 ESRRAP11474 423 aaPredicted RBP9.94□□□□□ -0.82
PCF11-202ENST00000528336 EIF4BP23588 611 aaKnown RBP9.94□□□□□ -0.82
PCF11-202ENST00000528336 ITPKAP23677 461 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 RASSF7Q02833 373 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 ZNF423Q2M1K9 1284 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 GALNT11Q8NCW6 608 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 ZNF576Q9H609 170 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 AK5Q9Y6K8 562 aa9.94□□□□□ -0.82
PCF11-202ENST00000528336 ZNF16P17020 682 aaPredicted RBP9.93□□□□□ -0.82
PCF11-202ENST00000528336 ARL4DP49703 201 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 ZNF157P51786 506 aaPredicted RBP9.93□□□□□ -0.82
PCF11-202ENST00000528336 PIP4K2BP78356 416 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 DAB2P98082 770 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 MAP4K3Q8IVH8 894 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 KLHDC7BQ96G42 594 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 SRCIN1Q9C0H9 1055 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
PCF11-202ENST00000528336 USP17L7P0C7H9 530 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 ELNP15502 786 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 GSTT1P30711 240 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 C19orf57Q0VDD7 668 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 MRS2Q9HD23 443 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
PCF11-202ENST00000528336 DDX3YO15523 660 aaKnown RBP9.91□□□□□ -0.82
PCF11-202ENST00000528336 APBA3O96018 575 aa9.91□□□□□ -0.82
PCF11-202ENST00000528336 XRCC5P13010 732 aaKnown RBP9.91□□□□□ -0.82
PCF11-202ENST00000528336 CD68P34810 354 aaPredicted RBP9.91□□□□□ -0.82
PCF11-202ENST00000528336 GSK3AP49840 483 aa9.91□□□□□ -0.82
PCF11-202ENST00000528336 GSTM4Q03013 218 aa9.91□□□□□ -0.82
PCF11-202ENST00000528336 PTPN12Q05209 780 aaKnown RBP9.91□□□□□ -0.82
PCF11-202ENST00000528336 TMC4Q7Z404 712 aa9.91□□□□□ -0.82
PCF11-202ENST00000528336 KLHL23Q8NBE8 558 aa9.91□□□□□ -0.82
PCF11-202ENST00000528336 C3orf58Q8NDZ4 430 aa9.91□□□□□ -0.82
PCF11-202ENST00000528336 SRA1Q9HD15 236 aaKnown RBP9.91□□□□□ -0.82
PCF11-202ENST00000528336 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 DLL1O00548 723 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 GDF11O95390 407 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 NLRP12P59046 1061 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 FAAP100Q0VG06 881 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 WNT8BQ93098 351 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 ZFYVE1Q9HBF4 777 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 OSGEPQ9NPF4 335 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 KCNK4Q9NYG8 393 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 VTI1BQ9UEU0 232 aa9.9□□□□□ -0.82
PCF11-202ENST00000528336 RBM47A0AV96 593 aaKnown RBP9.89□□□□□ -0.83
PCF11-202ENST00000528336 SORBS3O60504 671 aa9.89□□□□□ -0.83
PCF11-202ENST00000528336 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
PCF11-202ENST00000528336 RPS26P11Q5JNZ5 115 aaPredicted RBP9.89□□□□□ -0.83
PCF11-202ENST00000528336 ALYREFQ86V81 257 aaKnown RBP9.89□□□□□ -0.83
PCF11-202ENST00000528336 TMEM151AQ8N4L1 468 aa9.89□□□□□ -0.83
PCF11-202ENST00000528336 GPN3Q9UHW5 284 aaPredicted RBP9.89□□□□□ -0.83
PCF11-202ENST00000528336 FBXO24O75426 580 aa9.88□□□□□ -0.83
PCF11-202ENST00000528336 SELPP16109 830 aa9.88□□□□□ -0.83
PCF11-202ENST00000528336 FOXD4L6Q3SYB3 417 aaPredicted RBP9.88□□□□□ -0.83
PCF11-202ENST00000528336 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
PCF11-202ENST00000528336 FOXD4L3Q6VB84 417 aaPredicted RBP9.88□□□□□ -0.83
PCF11-202ENST00000528336 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
PCF11-202ENST00000528336 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
PCF11-202ENST00000528336 USP21Q9UK80 565 aa9.88□□□□□ -0.83
PCF11-202ENST00000528336 TM4SF5O14894 197 aa9.87□□□□□ -0.83
PCF11-202ENST00000528336 B3GALT4O96024 378 aa9.87□□□□□ -0.83
PCF11-202ENST00000528336 ADAM11O75078 769 aa9.86□□□□□ -0.83
PCF11-202ENST00000528336 DDX54Q8TDD1 881 aaKnown RBP9.86□□□□□ -0.83
PCF11-202ENST00000528336 NACC1Q96RE7 527 aa9.86□□□□□ -0.83
PCF11-202ENST00000528336 USP26Q9BXU7 913 aa9.86□□□□□ -0.83
PCF11-202ENST00000528336 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
PCF11-202ENST00000528336 TTF2Q9UNY4 1162 aaKnown RBP9.86□□□□□ -0.83
PCF11-202ENST00000528336 C9orf172C9J069 976 aa9.85□□□□□ -0.83
PCF11-202ENST00000528336 DUOXA2Q1HG44 320 aa9.85□□□□□ -0.83
PCF11-202ENST00000528336 UBASH3BQ8TF42 649 aa9.85□□□□□ -0.83
PCF11-202ENST00000528336 LENG1Q96BZ8 264 aaPredicted RBP9.85□□□□□ -0.83
PCF11-202ENST00000528336 SOX17Q9H6I2 414 aaPredicted RBP9.85□□□□□ -0.83
PCF11-202ENST00000528336 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
PCF11-202ENST00000528336 C1QTNF9BB2RNN3 333 aa9.84□□□□□ -0.83
PCF11-202ENST00000528336 WISP1O95388 367 aa9.84□□□□□ -0.83
PCF11-202ENST00000528336 CTSHP09668 335 aa9.84□□□□□ -0.83
PCF11-202ENST00000528336 PPP2R3AQ06190 1150 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms