RNA–Protein interactions for RNA: ENST00000527317.2

AP001993.1-201, humanhuman

TSL 2 BASIC

Gene AP001993.1, Length 2,337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001993.1-201ENST00000527317 YTHDC2Q9H6S0 1430 aaKnown RBP12.56□□□□□ -0.4
AP001993.1-201ENST00000527317 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 PDLIM1O00151 329 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 NEK4P51957 841 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 FAM81BQ96LP2 452 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 ZCWPW1Q9H0M4 648 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 RAB21Q9UL25 225 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 FRMD4BQ9Y2L6 1034 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 COL17A1Q9UMD9 1497 aaPredicted RBP12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 ERLIN1O75477 346 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 SYF2O95926 243 aaKnown RBP12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 GNAT1P11488 350 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 VCAM1P19320 739 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 CAMK4Q16566 473 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 ACSBG1Q96GR2 724 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 ABCB6Q9NP58 842 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 ZNF510Q9Y2H8 683 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
AP001993.1-201ENST00000527317 E2F6O75461 281 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 LINGO3P0C6S8 592 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 RPL13P26373 211 aaKnown RBP12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 ACCSLQ4AC99 568 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 SAPCD2Q86UD0 394 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 FAM114A1Q8IWE2 563 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 CKAP2LQ8IYA6 745 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 GALNT15Q8N3T1 639 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 SCLT1Q96NL6 688 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 SPAG5Q96R06 1193 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 NACA2Q9H009 215 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 OSBPL5Q9H0X9 879 aaPredicted RBP12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 ANKZF1Q9H8Y5 726 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 TPX2Q9ULW0 747 aaKnown RBP12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 SAMM50Q9Y512 469 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 B4DLN1 442 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 SLC27A2O14975 620 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 ZSCAN22P10073 491 aaPredicted RBP12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 INHBCP55103 352 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 PRPF40BQ6NWY9 871 aaKnown RBP12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 CYB5D1Q6P9G0 228 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 CCDC13Q8IYE1 715 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
AP001993.1-201ENST00000527317 KIF4AO95239 1232 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 TRIM27P14373 513 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 SPATS2Q86XZ4 545 aaKnown RBP12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 SYCP3Q8IZU3 236 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 IGSF22Q8N9C0 903 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 CXorf38Q8TB03 319 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 TSC22D3Q99576 134 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 EHD4Q9H223 541 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 GRIN2DO15399 1336 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 PTPRGP23470 1445 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 CUL3Q13618 768 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 PKN1Q16512 942 aa12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 RBM43Q6ZSC3 357 aaKnown RBP12.53□□□□□ -0.4
AP001993.1-201ENST00000527317 LRRIQ3A6PVS8 624 aaPredicted RBP12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 FOXD4Q12950 439 aaPredicted RBP12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 PNKPQ96T60 521 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
AP001993.1-201ENST00000527317 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 GOLGA6L10A6NI86 522 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 GOLGA6L19H0YKK7 550 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 BIN1O00499 593 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 LIN7AO14910 233 aaPredicted RBP12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 ZSCAN12O43309 604 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 Q4G0T1 1027 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 GBP3Q9H0R5 595 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 TNMDQ9H2S6 317 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 TRPC1P48995 793 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 FUKQ8N0W3 1084 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 GCC1Q96CN9 775 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 RABEP2Q9H5N1 569 aa12.51□□□□□ -0.41
AP001993.1-201ENST00000527317 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 PSME1Q06323 249 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms