RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 SSC5DA1L4H1 1573 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
FDFT1-211ENST00000527045 RPS8P62241 208 aaKnown RBP11.43□□□□□ -0.58
FDFT1-211ENST00000527045 AIMP1Q12904 312 aaKnown RBP11.43□□□□□ -0.58
FDFT1-211ENST00000527045 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 APOBEC3FQ8IUX4 373 aaKnown RBP11.43□□□□□ -0.58
FDFT1-211ENST00000527045 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 FAM122AQ96E09 287 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 MTMR10Q9NXD2 777 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 PODXL2Q9NZ53 605 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 RAPGEFL1Q9UHV5 662 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 GGA1Q9UJY5 639 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 OTOFQ9HC10 1997 aa11.43□□□□□ -0.58
FDFT1-211ENST00000527045 EVI5O60447 810 aa11.42□□□□□ -0.58
FDFT1-211ENST00000527045 PDIA6Q15084 440 aa11.42□□□□□ -0.58
FDFT1-211ENST00000527045 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
FDFT1-211ENST00000527045 TAF1CQ15572 869 aaPredicted RBP11.42□□□□□ -0.58
FDFT1-211ENST00000527045 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
FDFT1-211ENST00000527045 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
FDFT1-211ENST00000527045 TESPA1A2RU30 521 aaPredicted RBP11.41□□□□□ -0.58
FDFT1-211ENST00000527045 HTATSF1O43719 755 aaKnown RBP11.41□□□□□ -0.58
FDFT1-211ENST00000527045 PPP1R12BO60237 982 aaPredicted RBP11.41□□□□□ -0.58
FDFT1-211ENST00000527045 HSPA5P11021 654 aaKnown RBP11.41□□□□□ -0.58
FDFT1-211ENST00000527045 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
FDFT1-211ENST00000527045 GJA8P48165 433 aa11.41□□□□□ -0.58
FDFT1-211ENST00000527045 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
FDFT1-211ENST00000527045 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
FDFT1-211ENST00000527045 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
FDFT1-211ENST00000527045 ZFYVE28Q9HCC9 887 aa11.41□□□□□ -0.58
FDFT1-211ENST00000527045 EYSQ5T1H1 3165 aa11.41□□□□□ -0.58
FDFT1-211ENST00000527045 ECM29Q5VYK3 1845 aa11.4□□□□□ -0.58
FDFT1-211ENST00000527045 FARP2O94887 1054 aaPredicted RBP11.4□□□□□ -0.58
FDFT1-211ENST00000527045 COPS6Q7L5N1 327 aa11.4□□□□□ -0.58
FDFT1-211ENST00000527045 PODNQ7Z5L7 613 aa11.4□□□□□ -0.58
FDFT1-211ENST00000527045 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
FDFT1-211ENST00000527045 DEFB129Q9H1M3 183 aa11.4□□□□□ -0.58
FDFT1-211ENST00000527045 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.58
FDFT1-211ENST00000527045 CCL5P13501 91 aa11.39□□□□□ -0.59
FDFT1-211ENST00000527045 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
FDFT1-211ENST00000527045 KIF22Q14807 665 aa11.39□□□□□ -0.59
FDFT1-211ENST00000527045 DACT2Q5SW24 774 aa11.39□□□□□ -0.59
FDFT1-211ENST00000527045 XAGE3Q8WTP9 111 aa11.39□□□□□ -0.59
FDFT1-211ENST00000527045 RNF208Q9H0X6 261 aa11.39□□□□□ -0.59
FDFT1-211ENST00000527045 ELP3Q9H9T3 547 aa11.39□□□□□ -0.59
FDFT1-211ENST00000527045 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
FDFT1-211ENST00000527045 GJB1P08034 283 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
FDFT1-211ENST00000527045 BCAMP50895 628 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
FDFT1-211ENST00000527045 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
FDFT1-211ENST00000527045 KIAA0825Q8IV33 1275 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 BRI3BPQ8WY22 251 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 OPTNQ96CV9 577 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 MS4A4AQ96JQ5 239 aa11.38□□□□□ -0.59
FDFT1-211ENST00000527045 CCL15-CCL14A0A0B4J2E2 113 aa11.37□□□□□ -0.59
FDFT1-211ENST00000527045 USP2O75604 605 aaPredicted RBP11.37□□□□□ -0.59
FDFT1-211ENST00000527045 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
FDFT1-211ENST00000527045 CCL15Q16663 113 aa11.37□□□□□ -0.59
FDFT1-211ENST00000527045 NBPF12Q5TAG4 269 aaPredicted RBP11.37□□□□□ -0.59
FDFT1-211ENST00000527045 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
FDFT1-211ENST00000527045 GDF15Q99988 308 aa11.37□□□□□ -0.59
FDFT1-211ENST00000527045 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
FDFT1-211ENST00000527045 PRUNE2Q8WUY3 3088 aa11.37□□□□□ -0.59
FDFT1-211ENST00000527045 RPTORQ8N122 1335 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 MYO3BQ8WXR4 1341 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 UNCXA6NJT0 531 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
FDFT1-211ENST00000527045 GRK4P32298 578 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 BMP8BP34820 402 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 LRIT3Q3SXY7 679 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 ANKRD13AQ8IZ07 590 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 ZBED3Q96IU2 234 aaPredicted RBP11.36□□□□□ -0.59
FDFT1-211ENST00000527045 BIN2Q9UBW5 565 aaPredicted RBP11.36□□□□□ -0.59
FDFT1-211ENST00000527045 TTC28Q96AY4 2481 aa11.36□□□□□ -0.59
FDFT1-211ENST00000527045 XDHP47989 1333 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 GNRH1P01148 92 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 CTGFP29279 349 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 PRMT2P55345 433 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 SUPT20HL1Q3ZLR7 823 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 STRIP1Q5VSL9 837 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 RAET1EQ8TD07 263 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 ZMYND8Q9ULU4 1186 aaPredicted RBP11.35□□□□□ -0.59
FDFT1-211ENST00000527045 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 PCDHAC2Q9Y5I4 1007 aa11.35□□□□□ -0.59
FDFT1-211ENST00000527045 CLRN2A0PK11 232 aa11.34□□□□□ -0.59
FDFT1-211ENST00000527045 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
FDFT1-211ENST00000527045 TLR2O60603 784 aa11.34□□□□□ -0.59
FDFT1-211ENST00000527045 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
FDFT1-211ENST00000527045 GUCD1Q96NT3 240 aa11.34□□□□□ -0.59
FDFT1-211ENST00000527045 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
FDFT1-211ENST00000527045 UNC93B1Q9H1C4 597 aa11.34□□□□□ -0.59
FDFT1-211ENST00000527045 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
FDFT1-211ENST00000527045 NUDCQ9Y266 331 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms