RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 CCDC65Q8IXS2 484 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 CUL4BQ13620 913 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 PPP1R21Q6ZMI0 780 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 USHBP1Q8N6Y0 703 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 GBP7Q8N8V2 638 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 BRF1Q92994 677 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 NCAPGQ9BPX3 1015 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 TRIM75PA6NK02 468 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 GIPC1O14908 333 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 DNAJC21Q5F1R6 531 aaKnown RBP10.6□□□□□ -0.71
CTNND1-213ENST00000526357 NBPF6Q5VWK0 638 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 ZNF804AQ7Z570 1209 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 RSPH3Q86UC2 560 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 TBC1D31Q96DN5 1066 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 NBPF4Q96M43 638 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 STX10O60499 249 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 VIMP08670 466 aaKnown RBP10.6□□□□□ -0.71
CTNND1-213ENST00000526357 VWA3BQ502W6 1294 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 SRGAP1Q7Z6B7 1085 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 HAUS2Q9NVX0 235 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 FRMD4BQ9Y2L6 1034 aa10.6□□□□□ -0.71
CTNND1-213ENST00000526357 A0A1B0GUA9 196 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 MCM7P33993 719 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 RFC1P35251 1148 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-213ENST00000526357 PPP1R2P41236 205 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 PLS1Q14651 629 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 CAMSAP2Q08AD1 1489 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 GNAT2P19087 354 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 PCK1P35558 622 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 NBPF5PQ86XG9 351 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-213ENST00000526357 IFNL2Q8IZJ0 200 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 HSP90AA4PQ58FG1 418 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 SDCCAG8Q86SQ7 713 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-213ENST00000526357 ARHGAP24Q8N264 748 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 LEO1Q8WVC0 666 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-213ENST00000526357 RNF34Q969K3 372 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-213ENST00000526357 MCMDC2Q4G0Z9 681 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 SH2D4BQ5SQS7 431 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 CROCCP2Q86T23 111 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 USP48Q86UV5 1035 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 KRT5P13647 590 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 LIN9Q5TKA1 542 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 NAA16Q6N069 864 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-213ENST00000526357 RABGAP1Q9Y3P9 1069 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 NAIPQ13075 1403 aa10.59□□□□□ -0.71
CTNND1-213ENST00000526357 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
CTNND1-213ENST00000526357 RHOXF2BP0C7M4 288 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 EPB41P11171 864 aaKnown RBP10.58□□□□□ -0.72
CTNND1-213ENST00000526357 TAOK1Q7L7X3 1001 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 ZNF830Q96NB3 372 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-213ENST00000526357 RHOXF2Q9BQY4 288 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 A6NNZ2 444 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 SPTLC2O15270 562 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 ZNF853P0CG23 659 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 MARCKSP29966 332 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-213ENST00000526357 TSNAXIP1Q2TAA8 658 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 RILPL1Q5EBL4 403 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 Q6ZUG5 572 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 CNGA4Q8IV77 575 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 DNAJC25Q9H1X3 360 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 MAGEB6P1A0A0J9YX57 407 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 CETN3O15182 167 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 STMN1P16949 149 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 GNA11P29992 359 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 PICALMQ13492 652 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 TUBB2AQ13885 445 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 AKNAD1Q5T1N1 836 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 TUBB2BQ9BVA1 445 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 PLCG2P16885 1265 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 PHLDB2Q86SQ0 1253 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 RAPGEF1Q13905 1077 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
CTNND1-213ENST00000526357 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CTNND1-213ENST00000526357 UTP11Q9Y3A2 253 aaKnown RBP10.58□□□□□ -0.72
CTNND1-213ENST00000526357 DAPK3O43293 454 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 SNRPA1P09661 255 aaKnown RBP10.57□□□□□ -0.72
CTNND1-213ENST00000526357 FNBP1Q96RU3 617 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 LZTFL1Q9NQ48 299 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 RUSC2Q8N2Y8 1516 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 ADAMTS2O95450 1211 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 TNFAIP3P21580 790 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 AFAP1L1Q8TED9 768 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 SIRT1Q96EB6 747 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 EHBP1L1Q8N3D4 1523 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 PPFIA3O75145 1194 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 F13A1P00488 732 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 DTHD1Q6ZMT9 781 aa10.57□□□□□ -0.72
CTNND1-213ENST00000526357 UBE3BQ7Z3V4 1068 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms