RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 FAM84AQ96KN4 292 aa8.85□□□□□ -0.99
C11orf54-203ENST00000526335 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
C11orf54-203ENST00000526335 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
C11orf54-203ENST00000526335 CFPP27918 469 aa8.84□□□□□ -0.99
C11orf54-203ENST00000526335 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
C11orf54-203ENST00000526335 COL13A1Q5TAT6 717 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-203ENST00000526335 ATG4DQ86TL0 474 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-203ENST00000526335 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
C11orf54-203ENST00000526335 SLC5A6Q9Y289 635 aa8.84□□□□□ -0.99
C11orf54-203ENST00000526335 HYAL2Q12891 473 aa8.83□□□□□ -1
C11orf54-203ENST00000526335 ZNF574Q6ZN55 896 aaPredicted RBP8.83□□□□□ -1
C11orf54-203ENST00000526335 NLRP13Q86W25 1043 aa8.83□□□□□ -1
C11orf54-203ENST00000526335 NOVA2Q9UNW9 492 aaKnown RBP8.83□□□□□ -1
C11orf54-203ENST00000526335 FAM170BA6NMN3 283 aa8.82□□□□□ -1
C11orf54-203ENST00000526335 LCNL1Q6ZST4 164 aa8.82□□□□□ -1
C11orf54-203ENST00000526335 ZAR1Q86SH2 424 aa8.82□□□□□ -1
C11orf54-203ENST00000526335 CILP2Q8IUL8 1156 aa8.82□□□□□ -1
C11orf54-203ENST00000526335 ZSCAN18Q8TBC5 510 aaPredicted RBP8.82□□□□□ -1
C11orf54-203ENST00000526335 FBLIM1Q8WUP2 373 aa8.82□□□□□ -1
C11orf54-203ENST00000526335 PRIMPOLQ96LW4 560 aa8.82□□□□□ -1
C11orf54-203ENST00000526335 PTPRAP18433 802 aa8.81□□□□□ -1
C11orf54-203ENST00000526335 USP11P51784 963 aa8.81□□□□□ -1
C11orf54-203ENST00000526335 MESP2Q0VG99 397 aa8.81□□□□□ -1
C11orf54-203ENST00000526335 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
C11orf54-203ENST00000526335 NUTM2GQ5VZR2 741 aa8.81□□□□□ -1
C11orf54-203ENST00000526335 OR13H1Q8NG92 308 aa8.81□□□□□ -1
C11orf54-203ENST00000526335 MEGF11A6BM72 1044 aa8.8□□□□□ -1
C11orf54-203ENST00000526335 PRMT3O60678 531 aa8.8□□□□□ -1
C11orf54-203ENST00000526335 BRD2P25440 801 aaKnown RBP8.8□□□□□ -1
C11orf54-203ENST00000526335 RAP1GAPP47736 663 aa8.8□□□□□ -1
C11orf54-203ENST00000526335 PIP4K2BP78356 416 aa8.8□□□□□ -1
C11orf54-203ENST00000526335 SWI5Q1ZZU3 235 aa8.8□□□□□ -1
C11orf54-203ENST00000526335 ETFBKMTQ8IXQ9 262 aa8.8□□□□□ -1
C11orf54-203ENST00000526335 BHLHE22Q8NFJ8 381 aaPredicted RBP8.8□□□□□ -1
C11orf54-203ENST00000526335 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
C11orf54-203ENST00000526335 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
C11orf54-203ENST00000526335 C16orf46Q6P387 395 aa8.79□□□□□ -1
C11orf54-203ENST00000526335 ADAM19Q9H013 955 aa8.79□□□□□ -1
C11orf54-203ENST00000526335 ZMYND15Q9H091 742 aa8.79□□□□□ -1
C11orf54-203ENST00000526335 RC3H2Q9HBD1 1191 aaKnown RBP8.79□□□□□ -1
C11orf54-203ENST00000526335 PRKAG2Q9UGJ0 569 aa8.79□□□□□ -1
C11orf54-203ENST00000526335 JAG2Q9Y219 1238 aa8.79□□□□□ -1
C11orf54-203ENST00000526335 ACIN1Q9UKV3 1341 aaKnown RBP8.79□□□□□ -1
C11orf54-203ENST00000526335 H3BRJ5 948 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 CABP4P57796 275 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 CDPF1Q6NVV7 123 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 SPRED2Q7Z698 418 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 LRRC56Q8IYG6 542 aaPredicted RBP8.78□□□□□ -1
C11orf54-203ENST00000526335 GLIS3Q8NEA6 775 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 SLC7A3Q8WY07 619 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 WNT8BQ93098 351 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 OSGEPQ9NPF4 335 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 FAM13BQ9NYF5 915 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 LMCD1Q9NZU5 365 aa8.78□□□□□ -1
C11orf54-203ENST00000526335 ZNF777Q9ULD5 760 aaPredicted RBP8.78□□□□□ -1
C11orf54-203ENST00000526335 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
C11orf54-203ENST00000526335 SCNN1AP37088 669 aa8.77□□□□□ -1.01
C11orf54-203ENST00000526335 PIK3R5Q8WYR1 880 aa8.77□□□□□ -1.01
C11orf54-203ENST00000526335 PBX4Q9BYU1 374 aa8.77□□□□□ -1.01
C11orf54-203ENST00000526335 ZSCAN22P10073 491 aaPredicted RBP8.76□□□□□ -1.01
C11orf54-203ENST00000526335 C1QL4Q86Z23 238 aa8.76□□□□□ -1.01
C11orf54-203ENST00000526335 LRRC10BA6NIK2 292 aa8.75□□□□□ -1.01
C11orf54-203ENST00000526335 OCLNQ16625 522 aa8.75□□□□□ -1.01
C11orf54-203ENST00000526335 TTLL10Q6ZVT0 673 aa8.75□□□□□ -1.01
C11orf54-203ENST00000526335 SIAH1Q8IUQ4 282 aa8.75□□□□□ -1.01
C11orf54-203ENST00000526335 STK11IPQ8N1F8 1099 aa8.75□□□□□ -1.01
C11orf54-203ENST00000526335 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
C11orf54-203ENST00000526335 CYP4F12Q9HCS2 524 aa8.75□□□□□ -1.01
C11orf54-203ENST00000526335 TTBK1Q5TCY1 1321 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-203ENST00000526335 TIAF1O95411 115 aa8.74□□□□□ -1.01
C11orf54-203ENST00000526335 DRD2P14416 443 aa8.74□□□□□ -1.01
C11orf54-203ENST00000526335 WFDC3Q8IUB2 231 aa8.74□□□□□ -1.01
C11orf54-203ENST00000526335 POP1Q99575 1024 aaKnown RBP8.74□□□□□ -1.01
C11orf54-203ENST00000526335 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
C11orf54-203ENST00000526335 ECM1Q16610 540 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 FAM26DQ5JW98 314 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 TTC39BQ5VTQ0 682 aaPredicted RBP8.73□□□□□ -1.01
C11orf54-203ENST00000526335 GATA6Q92908 595 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 ZMIZ1Q9ULJ6 1067 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 FNDC3AQ9Y2H6 1198 aaKnown RBP8.73□□□□□ -1.01
C11orf54-203ENST00000526335 TNFRSF10BO14763 440 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 ZAP70P43403 619 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 ELOAQ14241 798 aaKnown RBP8.73□□□□□ -1.01
C11orf54-203ENST00000526335 ZNF765Q7L2R6 523 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 YIPF2Q9BWQ6 316 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 TMPRSS13Q9BYE2 586 aa8.73□□□□□ -1.01
C11orf54-203ENST00000526335 RNASE1P07998 156 aaKnown RBP8.72□□□□□ -1.01
C11orf54-203ENST00000526335 ARL4DP49703 201 aa8.72□□□□□ -1.01
C11orf54-203ENST00000526335 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
C11orf54-203ENST00000526335 BNIP3Q12983 259 aa8.72□□□□□ -1.01
C11orf54-203ENST00000526335 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
C11orf54-203ENST00000526335 SUGCTQ9HAC7 445 aa8.72□□□□□ -1.01
C11orf54-203ENST00000526335 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
C11orf54-203ENST00000526335 FAM69CQ0P6D2 419 aa8.71□□□□□ -1.02
C11orf54-203ENST00000526335 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
C11orf54-203ENST00000526335 MBNL3Q9NUK0 354 aaKnown RBP8.71□□□□□ -1.02
C11orf54-203ENST00000526335 RAPGEFL1Q9UHV5 662 aa8.71□□□□□ -1.02
C11orf54-203ENST00000526335 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
C11orf54-203ENST00000526335 FUT4P22083 530 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms