RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 DHX58Q96C10 678 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 A0A1W2PP64 1363 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 BICC1Q9H694 974 aaKnown RBP16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 BICDL2A1A5D9 508 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 FAM89AQ96GI7 184 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 TESK2Q96S53 571 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 DACT1Q9NYF0 836 aa16.44■□□□□ 0.22
NCAPD3-203ENST00000525964 MAST3O60307 1309 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 HIBADHP31937 336 aaKnown RBP16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 SSX2IPQ9Y2D8 614 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 KRT24Q2M2I5 525 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 UFL1O94874 794 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 WWC3Q9ULE0 1092 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 CNPY2Q9Y2B0 182 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 SNX21Q969T3 373 aa16.43■□□□□ 0.22
NCAPD3-203ENST00000525964 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 BACH1O14867 736 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 MBD4O95243 580 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 CA8P35219 290 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 METTL22Q9BUU2 404 aaPredicted RBP16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 SELENOOQ9BVL4 669 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 MRVI1Q9Y6F6 885 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 PDE8AO60658 829 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 IQUBQ8NA54 791 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 MICALCLQ6ZW33 695 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
NCAPD3-203ENST00000525964 APOBRQ0VD83 1088 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 PTPDC1A2A3K4 754 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 ITGA6P23229 1130 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 USP48Q86UV5 1035 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 LMBR1Q8WVP7 490 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 GGA1Q9UJY5 639 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 A0A1B0GUL7 405 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 ANO6Q4KMQ2 910 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 SMC5Q8IY18 1101 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 RTL1A6NKG5 1358 aa16.41■□□□□ 0.22
NCAPD3-203ENST00000525964 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 TACC1O75410 805 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 DNM1Q05193 864 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 MAATS1Q7Z4T9 603 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 AK2P54819 239 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 CHST3Q7LGC8 479 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 APBB1IPQ7Z5R6 666 aaPredicted RBP16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 CARD14Q9BXL6 1004 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 UHRF1BP1Q6BDS2 1440 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 GRIPAP1Q4V328 841 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 PAXBP1Q9Y5B6 917 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 RPL13P26373 211 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 CHMLP26374 656 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
NCAPD3-203ENST00000525964 ATL3Q6DD88 541 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 CTR9Q6PD62 1173 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 FMNL3Q8IVF7 1028 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 PDE6BP35913 854 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 KRT83P78385 493 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 PICK1Q9NRD5 415 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 FERP16591 822 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 MCM7P33993 719 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 GJA3Q9Y6H8 435 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 ZNF354CQ86Y25 554 aa16.39■□□□□ 0.21
NCAPD3-203ENST00000525964 TIMM10P62072 90 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 BRDTQ58F21 947 aaPredicted RBP16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 PPP1R14CQ8TAE6 165 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 SREK1Q8WXA9 508 aaKnown RBP16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 ORAI2Q96SN7 254 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 PPP1R2P41236 205 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 AOPEPQ8N6M6 819 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 CCDC77Q9BR77 488 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 RASAL2Q9UJF2 1139 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms