RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PRR19A6NJB7 356 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 SOX1O00570 391 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-210ENST00000525878 EDN3P14138 238 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 USP5P45974 858 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 SLC7A3Q8WY07 619 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 RUSC1Q9BVN2 902 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 BHLHE41Q9C0J9 482 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-210ENST00000525878 C1orf115Q9H7X2 142 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 HIF3AQ9Y2N7 669 aa8.71□□□□□ -1.02
CSDE1-210ENST00000525878 PHACTR2O75167 634 aa8.7□□□□□ -1.02
CSDE1-210ENST00000525878 BMP3P12645 472 aa8.7□□□□□ -1.02
CSDE1-210ENST00000525878 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
CSDE1-210ENST00000525878 PEAR1Q5VY43 1037 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-210ENST00000525878 GJD3Q8N144 294 aa8.7□□□□□ -1.02
CSDE1-210ENST00000525878 SOX17Q9H6I2 414 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-210ENST00000525878 FOXD3Q9UJU5 478 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-210ENST00000525878 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
CSDE1-210ENST00000525878 SPINK2P20155 84 aa8.69□□□□□ -1.02
CSDE1-210ENST00000525878 ARL4DP49703 201 aa8.69□□□□□ -1.02
CSDE1-210ENST00000525878 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
CSDE1-210ENST00000525878 MCTP1Q6DN14 999 aa8.69□□□□□ -1.02
CSDE1-210ENST00000525878 BEND4Q6ZU67 534 aa8.69□□□□□ -1.02
CSDE1-210ENST00000525878 TMPRSS13Q9BYE2 586 aa8.69□□□□□ -1.02
CSDE1-210ENST00000525878 SART1O43290 800 aaKnown RBP8.68□□□□□ -1.02
CSDE1-210ENST00000525878 IKBKEQ14164 716 aa8.68□□□□□ -1.02
CSDE1-210ENST00000525878 INTS5Q6P9B9 1019 aaKnown RBP8.68□□□□□ -1.02
CSDE1-210ENST00000525878 SUGCTQ9HAC7 445 aa8.68□□□□□ -1.02
CSDE1-210ENST00000525878 MTMR7Q9Y216 660 aa8.68□□□□□ -1.02
CSDE1-210ENST00000525878 COL17A1Q9UMD9 1497 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-210ENST00000525878 FDX2Q6P4F2 183 aa8.67□□□□□ -1.02
CSDE1-210ENST00000525878 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
CSDE1-210ENST00000525878 LATS2Q9NRM7 1088 aa8.67□□□□□ -1.02
CSDE1-210ENST00000525878 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
CSDE1-210ENST00000525878 LOC100289279A0A1B0GTE1 492 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 CARNS1A5YM72 827 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 ADAMTS4O75173 837 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 TIAF1O95411 115 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 DLGAP3O95886 979 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 ESRRAP11474 423 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-210ENST00000525878 AAMPQ13685 434 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 DTX1Q86Y01 620 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 ZFYVE28Q9HCC9 887 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 AMOTL2Q9Y2J4 779 aa8.66□□□□□ -1.02
CSDE1-210ENST00000525878 GRIK1P39086 918 aa8.65□□□□□ -1.02
CSDE1-210ENST00000525878 SHKBP1Q8TBC3 707 aa8.65□□□□□ -1.02
CSDE1-210ENST00000525878 KCNF1Q9H3M0 494 aa8.65□□□□□ -1.02
CSDE1-210ENST00000525878 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
CSDE1-210ENST00000525878 ASAP3Q8TDY4 903 aa8.64□□□□□ -1.03
CSDE1-210ENST00000525878 NRSN2Q9GZP1 204 aa8.64□□□□□ -1.03
CSDE1-210ENST00000525878 OAS3Q9Y6K5 1087 aaKnown RBP8.64□□□□□ -1.03
CSDE1-210ENST00000525878 MAP4P27816 1152 aaKnown RBP8.63□□□□□ -1.03
CSDE1-210ENST00000525878 GP2P55259 537 aaKnown RBP8.63□□□□□ -1.03
CSDE1-210ENST00000525878 SGO2Q562F6 1265 aa8.63□□□□□ -1.03
CSDE1-210ENST00000525878 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
CSDE1-210ENST00000525878 EGFL7Q9UHF1 273 aa8.63□□□□□ -1.03
CSDE1-210ENST00000525878 METTL12A8MUP2 240 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 ZNF211Q13398 564 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-210ENST00000525878 ECM1Q16610 540 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 EXOSC6Q5RKV6 272 aaKnown RBP8.62□□□□□ -1.03
CSDE1-210ENST00000525878 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 CYP4F12Q9HCS2 524 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
CSDE1-210ENST00000525878 GAS2O43903 313 aaKnown RBP8.61□□□□□ -1.03
CSDE1-210ENST00000525878 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-210ENST00000525878 ABL1P00519 1130 aa8.61□□□□□ -1.03
CSDE1-210ENST00000525878 CCNJLQ8IV13 435 aa8.61□□□□□ -1.03
CSDE1-210ENST00000525878 C12orf50Q8NA57 414 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-210ENST00000525878 A0A1W2PP55 124 aa8.6□□□□□ -1.03
CSDE1-210ENST00000525878 ICMTO60725 284 aa8.6□□□□□ -1.03
CSDE1-210ENST00000525878 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-210ENST00000525878 LCE3BQ5TA77 95 aa8.6□□□□□ -1.03
CSDE1-210ENST00000525878 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
CSDE1-210ENST00000525878 TCF12Q99081 682 aa8.6□□□□□ -1.03
CSDE1-210ENST00000525878 WDR64B1ANS9 1081 aa8.59□□□□□ -1.03
CSDE1-210ENST00000525878 C2CD4AQ8NCU7 369 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-210ENST00000525878 USTQ9Y2C2 406 aa8.59□□□□□ -1.03
CSDE1-210ENST00000525878 A0A096LPE4 126 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 F13BP05160 661 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 DRD2P14416 443 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 GRIA4P48058 902 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 IRAK1P51617 712 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 GSTM4Q03013 218 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 ZNF423Q2M1K9 1284 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 EZH1Q92800 747 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-210ENST00000525878 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 CLEC4MQ9H2X3 399 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-210ENST00000525878 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
CSDE1-210ENST00000525878 HOXA10P31260 410 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-210ENST00000525878 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-210ENST00000525878 PCDH1Q08174 1060 aa8.57□□□□□ -1.04
CSDE1-210ENST00000525878 CPSF6Q16630 551 aaKnown RBP eCLIP8.57□□□□□ -1.04
CSDE1-210ENST00000525878 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
CSDE1-210ENST00000525878 FAM95CA0A1B0GW59 222 aa8.56□□□□□ -1.04
CSDE1-210ENST00000525878 WNT11O96014 354 aa8.56□□□□□ -1.04
CSDE1-210ENST00000525878 ARHGAP4P98171 946 aa8.56□□□□□ -1.04
CSDE1-210ENST00000525878 SPRED3Q2MJR0 410 aa8.56□□□□□ -1.04
CSDE1-210ENST00000525878 KIAA0319Q5VV43 1072 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms