RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 KCNH4Q9UQ05 1017 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 PCDHGC4Q9Y5F7 938 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 TRPA1O75762 1119 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 KIF4AO95239 1232 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 HOXD8P13378 290 aaPredicted RBP4.35□□□□□ -1.71
LINC01339-204ENST00000524094 PCSK2P16519 638 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 ERCC5P28715 1186 aaPredicted RBP4.35□□□□□ -1.71
LINC01339-204ENST00000524094 ZNF394Q53GI3 561 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 ERMP1Q7Z2K6 904 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 CEP120Q8N960 986 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 RNF34Q969K3 372 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 ABHD17AQ96GS6 310 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 CRELD1Q96HD1 420 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 GMLQ99445 158 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 ACBD3Q9H3P7 528 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 VTI1BQ9UEU0 232 aa4.35□□□□□ -1.71
LINC01339-204ENST00000524094 GIPC1O14908 333 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ATXN7O15265 892 aaPredicted RBP4.34□□□□□ -1.71
LINC01339-204ENST00000524094 PHACTR2O75167 634 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 MAP3K6O95382 1288 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 SELPP16109 830 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ADH6P28332 368 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ZNF76P36508 570 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ZC3H6P61129 1189 aaKnown RBP4.34□□□□□ -1.71
LINC01339-204ENST00000524094 FGD1P98174 961 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ATP2B2Q01814 1243 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 CCINQ13939 588 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 LBRQ14739 615 aaKnown RBP4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ZNF124Q15973 351 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 SLC51AQ86UW1 340 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 FCHSD1Q86WN1 690 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 SLC43A3Q8NBI5 491 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 ANKRD24Q8TF21 1146 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 HHIPQ96QV1 700 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 TGIF2Q9GZN2 237 aa4.34□□□□□ -1.71
LINC01339-204ENST00000524094 FNDC3AQ9Y2H6 1198 aaKnown RBP4.34□□□□□ -1.71
LINC01339-204ENST00000524094 DCAF1Q9Y4B6 1507 aa4.33□□□□□ -1.72
LINC01339-204ENST00000524094 NEFLP07196 543 aa4.33□□□□□ -1.72
LINC01339-204ENST00000524094 USP17L7P0C7H9 530 aa4.33□□□□□ -1.72
LINC01339-204ENST00000524094 EIF4BP23588 611 aaKnown RBP4.33□□□□□ -1.72
LINC01339-204ENST00000524094 TAF1CQ15572 869 aaPredicted RBP4.33□□□□□ -1.72
LINC01339-204ENST00000524094 TRIM56Q9BRZ2 755 aaKnown RBP4.33□□□□□ -1.72
LINC01339-204ENST00000524094 ABCB6Q9NP58 842 aa4.33□□□□□ -1.72
LINC01339-204ENST00000524094 TLR7Q9NYK1 1049 aaKnown RBP4.33□□□□□ -1.72
LINC01339-204ENST00000524094 KANSL3Q9P2N6 904 aa4.33□□□□□ -1.72
LINC01339-204ENST00000524094 PCDHGB7Q9Y5F8 929 aa4.33□□□□□ -1.72
LINC01339-204ENST00000524094 LMTK3Q96Q04 1460 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 SHROOM4Q9ULL8 1493 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 GARTP22102 1010 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 GRIA4P48058 902 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 ST13P50502 369 aaKnown RBP4.32□□□□□ -1.72
LINC01339-204ENST00000524094 PRPF40BQ6NWY9 871 aaKnown RBP4.32□□□□□ -1.72
LINC01339-204ENST00000524094 KRT25Q7Z3Z0 450 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 CCNJLQ8IV13 435 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 ASIC4Q96FT7 647 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 ZKSCAN3Q9BRR0 538 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 NEUROD4Q9HD90 331 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 DZANK1Q9NVP4 752 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 FAM8A1Q9UBU6 413 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 SPG7Q9UQ90 795 aa4.32□□□□□ -1.72
LINC01339-204ENST00000524094 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.32□□□□□ -1.72
LINC01339-204ENST00000524094 TMEM238LA0A1B0GVL6 79 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 DCDC2BA2VCK2 349 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 METTL12A8MUP2 240 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 KHNYNO15037 678 aaKnown RBP4.31□□□□□ -1.72
LINC01339-204ENST00000524094 CD33P20138 364 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 CES1P23141 567 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 SOX18P35713 384 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 SPEM2Q0P670 501 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 FAAP100Q0VG06 881 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 SPRED3Q2MJR0 410 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 FAM182BQ5T319 152 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 RASIP1Q5U651 963 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 RAB44Q7Z6P3 723 aaPredicted RBP4.31□□□□□ -1.72
LINC01339-204ENST00000524094 TRPM4Q8TD43 1214 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 SREK1Q8WXA9 508 aaKnown RBP4.31□□□□□ -1.72
LINC01339-204ENST00000524094 PMEPA1Q969W9 287 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 NXPE3Q969Y0 559 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 LENG1Q96BZ8 264 aaPredicted RBP4.31□□□□□ -1.72
LINC01339-204ENST00000524094 DRC1Q96MC2 740 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 RSRP1Q9BUV0 290 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 MRS2Q9HD23 443 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 KCNQ5Q9NR82 932 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 MARK1Q9P0L2 795 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 USP35Q9P2H5 1018 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 ADAMTS1Q9UHI8 967 aa4.31□□□□□ -1.72
LINC01339-204ENST00000524094 J3QW42 95 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 NFKB1P19838 968 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 GJA8P48165 433 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 PLAURQ03405 335 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 RBL2Q08999 1139 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 COL9A3Q14050 684 aaPredicted RBP4.3□□□□□ -1.72
LINC01339-204ENST00000524094 EFHC2Q5JST6 749 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 ZNF648Q5T619 568 aaPredicted RBP4.3□□□□□ -1.72
LINC01339-204ENST00000524094 TTC39BQ5VTQ0 682 aaPredicted RBP4.3□□□□□ -1.72
LINC01339-204ENST00000524094 PGBD3Q8N328 593 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 SRCIN1Q9C0H9 1055 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 NLRP2Q9NX02 1062 aa4.3□□□□□ -1.72
LINC01339-204ENST00000524094 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.3□□□□□ -1.72
LINC01339-204ENST00000524094 MYO15BQ96JP2 1530 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms