RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 OSBPL7Q9BZF2 842 aa9.65□□□□□ -0.86
CPNE3-207ENST00000523588 RNF19AQ9NV58 838 aa9.65□□□□□ -0.86
CPNE3-207ENST00000523588 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
CPNE3-207ENST00000523588 SOX1O00570 391 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-207ENST00000523588 CABP4P57796 275 aa9.64□□□□□ -0.87
CPNE3-207ENST00000523588 TAGLNQ01995 201 aaKnown RBP9.64□□□□□ -0.87
CPNE3-207ENST00000523588 HGSNATQ68CP4 663 aa9.64□□□□□ -0.87
CPNE3-207ENST00000523588 ESRRAP11474 423 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-207ENST00000523588 SELPP16109 830 aa9.63□□□□□ -0.87
CPNE3-207ENST00000523588 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
CPNE3-207ENST00000523588 DUSP9Q99956 384 aaKnown RBP9.63□□□□□ -0.87
CPNE3-207ENST00000523588 ITGB2P05107 769 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 ZNF423Q2M1K9 1284 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 FAM117BQ6P1L5 589 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 SHISA2Q6UWI4 295 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 WNT8BQ93098 351 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 CLEC4MQ9H2X3 399 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-207ENST00000523588 ZNF576Q9H609 170 aa9.62□□□□□ -0.87
CPNE3-207ENST00000523588 GIPC1O14908 333 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 FCGRTP55899 365 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 FGD1P98174 961 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 PCDH1Q08174 1060 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 IKBKEQ14164 716 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 KLHDC7BQ96G42 594 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 OSGEPQ9NPF4 335 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 SEC31BQ9NQW1 1179 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 KCNK4Q9NYG8 393 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
CPNE3-207ENST00000523588 GNA15P30679 374 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 CHRNA4P43681 627 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-207ENST00000523588 IGF2-ASQ6U949 168 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
CPNE3-207ENST00000523588 CD163Q86VB7 1156 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 KLHL23Q8NBE8 558 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 FRMD6Q96NE9 622 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 PPP4R2Q9NY27 417 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 PARP2Q9UGN5 583 aa9.6□□□□□ -0.87
CPNE3-207ENST00000523588 CD68P34810 354 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-207ENST00000523588 PLA2G4EQ3MJ16 856 aa9.59□□□□□ -0.87
CPNE3-207ENST00000523588 SLC7A3Q8WY07 619 aa9.59□□□□□ -0.87
CPNE3-207ENST00000523588 LENG1Q96BZ8 264 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-207ENST00000523588 SRCIN1Q9C0H9 1055 aa9.59□□□□□ -0.87
CPNE3-207ENST00000523588 SOX17Q9H6I2 414 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-207ENST00000523588 C12orf49Q9H741 205 aa9.59□□□□□ -0.87
CPNE3-207ENST00000523588 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 ADAM11O75078 769 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 APBA3O96018 575 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 C19orf57Q0VDD7 668 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 FAAP100Q0VG06 881 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 RPS26P11Q5JNZ5 115 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-207ENST00000523588 DTHD1Q6ZMT9 781 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 NACC1Q96RE7 527 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
CPNE3-207ENST00000523588 C9orf172C9J069 976 aa9.57□□□□□ -0.88
CPNE3-207ENST00000523588 DDX3YO15523 660 aaKnown RBP9.57□□□□□ -0.88
CPNE3-207ENST00000523588 B3GALT4O96024 378 aa9.57□□□□□ -0.88
CPNE3-207ENST00000523588 XRCC5P13010 732 aaKnown RBP9.57□□□□□ -0.88
CPNE3-207ENST00000523588 DAB2P98082 770 aa9.57□□□□□ -0.88
CPNE3-207ENST00000523588 SUZ12Q15022 739 aaKnown RBP9.57□□□□□ -0.88
CPNE3-207ENST00000523588 DCAF11Q8TEB1 546 aa9.57□□□□□ -0.88
CPNE3-207ENST00000523588 FOXD4L4Q8WXT5 416 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-207ENST00000523588 AK5Q9Y6K8 562 aa9.57□□□□□ -0.88
CPNE3-207ENST00000523588 GSTT1P30711 240 aa9.56□□□□□ -0.88
CPNE3-207ENST00000523588 ARL4DP49703 201 aa9.56□□□□□ -0.88
CPNE3-207ENST00000523588 GIPC2Q8TF65 315 aa9.56□□□□□ -0.88
CPNE3-207ENST00000523588 WISP1O95388 367 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 ADGRE1Q14246 886 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 TMC4Q7Z404 712 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 FAM161BQ96MY7 647 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 NRSN2Q9GZP1 204 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 MRPL18Q9H0U6 180 aaKnown RBP9.55□□□□□ -0.88
CPNE3-207ENST00000523588 ZFYVE1Q9HBF4 777 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 FAM8A1Q9UBU6 413 aa9.55□□□□□ -0.88
CPNE3-207ENST00000523588 EIF4BP23588 611 aaKnown RBP9.54□□□□□ -0.88
CPNE3-207ENST00000523588 NRG1Q02297 640 aaPredicted RBP9.54□□□□□ -0.88
CPNE3-207ENST00000523588 GSTM4Q03013 218 aa9.54□□□□□ -0.88
CPNE3-207ENST00000523588 MBTPS1Q14703 1052 aa9.54□□□□□ -0.88
CPNE3-207ENST00000523588 TMEM130Q8N3G9 435 aa9.54□□□□□ -0.88
CPNE3-207ENST00000523588 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
CPNE3-207ENST00000523588 AKAP2Q9Y2D5 859 aa9.54□□□□□ -0.88
CPNE3-207ENST00000523588 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
CPNE3-207ENST00000523588 NLRP12P59046 1061 aa9.53□□□□□ -0.88
CPNE3-207ENST00000523588 XPCQ01831 940 aaPredicted RBP9.53□□□□□ -0.88
CPNE3-207ENST00000523588 PSMD2Q13200 908 aa9.53□□□□□ -0.88
CPNE3-207ENST00000523588 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
CPNE3-207ENST00000523588 UBASH3BQ8TF42 649 aa9.53□□□□□ -0.88
CPNE3-207ENST00000523588 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
CPNE3-207ENST00000523588 USP21Q9UK80 565 aa9.53□□□□□ -0.88
CPNE3-207ENST00000523588 ZNF16P17020 682 aaPredicted RBP9.52□□□□□ -0.89
CPNE3-207ENST00000523588 KIAA1211Q6ZU35 1233 aa9.52□□□□□ -0.89
CPNE3-207ENST00000523588 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.52□□□□□ -0.89
CPNE3-207ENST00000523588 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-207ENST00000523588 ZNF157P51786 506 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-207ENST00000523588 DUOXA2Q1HG44 320 aa9.51□□□□□ -0.89
CPNE3-207ENST00000523588 PPM1HQ9ULR3 514 aa9.51□□□□□ -0.89
CPNE3-207ENST00000523588 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms