RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 HMX2A2RU54 273 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 COBLO75128 1261 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 TGFB1P01137 390 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 PREPP48147 710 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 RNF43Q68DV7 783 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 CLEC10AQ8IUN9 316 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
SGCE-211ENST00000522045 HIF3AQ9Y2N7 669 aa9.95□□□□□ -0.82
SGCE-211ENST00000522045 CARNS1A5YM72 827 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 BMP3P12645 472 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 ZNF211Q13398 564 aaPredicted RBP9.94□□□□□ -0.82
SGCE-211ENST00000522045 VN1R5Q7Z5H4 357 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 ZDHHC13Q8IUH4 622 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 GJD3Q8N144 294 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 ASAP3Q8TDY4 903 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 KCNF1Q9H3M0 494 aa9.94□□□□□ -0.82
SGCE-211ENST00000522045 SOX1O00570 391 aaPredicted RBP9.93□□□□□ -0.82
SGCE-211ENST00000522045 GAS2O43903 313 aaKnown RBP9.93□□□□□ -0.82
SGCE-211ENST00000522045 HGSNATQ68CP4 663 aa9.93□□□□□ -0.82
SGCE-211ENST00000522045 FAM83CQ9BQN1 747 aa9.93□□□□□ -0.82
SGCE-211ENST00000522045 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
SGCE-211ENST00000522045 CCDC87Q9NVE4 849 aa9.93□□□□□ -0.82
SGCE-211ENST00000522045 MEGF11A6BM72 1044 aa9.92□□□□□ -0.82
SGCE-211ENST00000522045 KIAA1324LA8MWY0 1029 aaPredicted RBP9.92□□□□□ -0.82
SGCE-211ENST00000522045 GRIK1P39086 918 aa9.92□□□□□ -0.82
SGCE-211ENST00000522045 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
SGCE-211ENST00000522045 BEND4Q6ZU67 534 aa9.92□□□□□ -0.82
SGCE-211ENST00000522045 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
SGCE-211ENST00000522045 SOX17Q9H6I2 414 aaPredicted RBP9.92□□□□□ -0.82
SGCE-211ENST00000522045 PEAR1Q5VY43 1037 aaPredicted RBP9.91□□□□□ -0.82
SGCE-211ENST00000522045 ZFYVE28Q9HCC9 887 aa9.91□□□□□ -0.82
SGCE-211ENST00000522045 LATS2Q9NRM7 1088 aa9.91□□□□□ -0.82
SGCE-211ENST00000522045 USTQ9Y2C2 406 aa9.91□□□□□ -0.82
SGCE-211ENST00000522045 NUTM2GQ5VZR2 741 aa9.9□□□□□ -0.82
SGCE-211ENST00000522045 INTS5Q6P9B9 1019 aaKnown RBP9.9□□□□□ -0.82
SGCE-211ENST00000522045 EGFL7Q9UHF1 273 aa9.9□□□□□ -0.82
SGCE-211ENST00000522045 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
SGCE-211ENST00000522045 ESRRAP11474 423 aaPredicted RBP9.89□□□□□ -0.83
SGCE-211ENST00000522045 TMPRSS13Q9BYE2 586 aa9.89□□□□□ -0.83
SGCE-211ENST00000522045 CYP4F12Q9HCS2 524 aa9.89□□□□□ -0.83
SGCE-211ENST00000522045 LOC100289279A0A1B0GTE1 492 aa9.88□□□□□ -0.83
SGCE-211ENST00000522045 MED26O95402 600 aa9.88□□□□□ -0.83
SGCE-211ENST00000522045 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
SGCE-211ENST00000522045 C12orf50Q8NA57 414 aaPredicted RBP9.88□□□□□ -0.83
SGCE-211ENST00000522045 SHKBP1Q8TBC3 707 aa9.88□□□□□ -0.83
SGCE-211ENST00000522045 KRTAP9-2Q9BYQ4 174 aa9.88□□□□□ -0.83
SGCE-211ENST00000522045 SUGCTQ9HAC7 445 aa9.88□□□□□ -0.83
SGCE-211ENST00000522045 ICMTO60725 284 aa9.87□□□□□ -0.83
SGCE-211ENST00000522045 MAP4P27816 1152 aaKnown RBP9.87□□□□□ -0.83
SGCE-211ENST00000522045 SMG8Q8ND04 991 aaKnown RBP9.87□□□□□ -0.83
SGCE-211ENST00000522045 PRR19A6NJB7 356 aa9.86□□□□□ -0.83
SGCE-211ENST00000522045 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.86□□□□□ -0.83
SGCE-211ENST00000522045 POLR3DP05423 398 aaPredicted RBP9.86□□□□□ -0.83
SGCE-211ENST00000522045 GSTM4Q03013 218 aa9.86□□□□□ -0.83
SGCE-211ENST00000522045 BRPF3Q9ULD4 1205 aa9.86□□□□□ -0.83
SGCE-211ENST00000522045 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 H3BRB1 525 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 RXRBP28702 533 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 SGO2Q562F6 1265 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 MCTP1Q6DN14 999 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 GLYCTKQ8IVS8 523 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 GALNT12Q8IXK2 581 aa9.85□□□□□ -0.83
SGCE-211ENST00000522045 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
SGCE-211ENST00000522045 TIAF1O95411 115 aa9.84□□□□□ -0.83
SGCE-211ENST00000522045 SPINK2P20155 84 aa9.84□□□□□ -0.83
SGCE-211ENST00000522045 EXOSC6Q5RKV6 272 aaKnown RBP9.84□□□□□ -0.83
SGCE-211ENST00000522045 CCNJLQ8IV13 435 aa9.84□□□□□ -0.83
SGCE-211ENST00000522045 GIMAP7Q8NHV1 300 aa9.84□□□□□ -0.83
SGCE-211ENST00000522045 A0A096LPE4 126 aa9.83□□□□□ -0.84
SGCE-211ENST00000522045 A0A1W2PPZ6 126 aa9.83□□□□□ -0.84
SGCE-211ENST00000522045 NEFLP07196 543 aa9.83□□□□□ -0.84
SGCE-211ENST00000522045 MFSD14AQ96MC6 490 aa9.83□□□□□ -0.84
SGCE-211ENST00000522045 CLEC4MQ9H2X3 399 aaPredicted RBP9.83□□□□□ -0.84
SGCE-211ENST00000522045 LIN7BQ9HAP6 207 aa9.83□□□□□ -0.84
SGCE-211ENST00000522045 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 A0A1W2PP55 124 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 WDR64B1ANS9 1081 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 NDUFB5O43674 189 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 DLGAP3O95886 979 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 SERPINB4P48594 390 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 GP2P55259 537 aaKnown RBP9.82□□□□□ -0.84
SGCE-211ENST00000522045 PCDH1Q08174 1060 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 DTX1Q86Y01 620 aa9.82□□□□□ -0.84
SGCE-211ENST00000522045 IRAK1P51617 712 aa9.81□□□□□ -0.84
SGCE-211ENST00000522045 USP11P51784 963 aa9.81□□□□□ -0.84
SGCE-211ENST00000522045 TCF12Q99081 682 aa9.81□□□□□ -0.84
SGCE-211ENST00000522045 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
SGCE-211ENST00000522045 FAM95CA0A1B0GW59 222 aa9.8□□□□□ -0.84
SGCE-211ENST00000522045 GRIA4P48058 902 aa9.8□□□□□ -0.84
SGCE-211ENST00000522045 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
SGCE-211ENST00000522045 NRSN2Q9GZP1 204 aa9.8□□□□□ -0.84
SGCE-211ENST00000522045 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
SGCE-211ENST00000522045 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
SGCE-211ENST00000522045 OAS3Q9Y6K5 1087 aaKnown RBP9.8□□□□□ -0.84
SGCE-211ENST00000522045 CYP11A1P05108 521 aa9.79□□□□□ -0.84
SGCE-211ENST00000522045 DRD2P14416 443 aa9.79□□□□□ -0.84
SGCE-211ENST00000522045 CPSF6Q16630 551 aaKnown RBP eCLIP9.79□□□□□ -0.84
SGCE-211ENST00000522045 HP1BP3Q5SSJ5 553 aaPredicted RBP9.79□□□□□ -0.84
SGCE-211ENST00000522045 PAOXQ6QHF9 649 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms