RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 BCS1LQ9Y276 419 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 DUOX1Q9NRD9 1551 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 LTBP1Q14766 1721 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 KIAA1551Q9HCM1 1747 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 IDH1O75874 414 aaKnown RBP25.83■■□□□ 1.73
R3HCC1-208ENST00000522012 NMIQ13287 307 aaPredicted RBP25.83■■□□□ 1.73
R3HCC1-208ENST00000522012 LRRFIP1Q32MZ4 808 aaKnown RBP25.83■■□□□ 1.73
R3HCC1-208ENST00000522012 RUFY2Q8WXA3 655 aa25.83■■□□□ 1.73
R3HCC1-208ENST00000522012 COA1Q9GZY4 146 aa25.83■■□□□ 1.73
R3HCC1-208ENST00000522012 CACNA1SQ13698 1873 aa25.83■■□□□ 1.73
R3HCC1-208ENST00000522012 EIF5BO60841 1220 aaKnown RBP25.83■■□□□ 1.72
R3HCC1-208ENST00000522012 IL1R1P14778 569 aa25.83■■□□□ 1.72
R3HCC1-208ENST00000522012 DOK7Q18PE1 504 aa25.83■■□□□ 1.72
R3HCC1-208ENST00000522012 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.83■■□□□ 1.72
R3HCC1-208ENST00000522012 RFX7Q2KHR2 1363 aa25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 COL1A1P02452 1464 aaPredicted RBP25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 RNF113AO15541 343 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 TICAM2Q86XR7 235 aa25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 FAM227BQ96M60 508 aa25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 ABCF2Q9UG63 623 aa25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 JAG2Q9Y219 1238 aa25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 PDS5AQ29RF7 1337 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 SNED1Q8TER0 1413 aa25.82■■□□□ 1.72
R3HCC1-208ENST00000522012 ZBTB22O15209 634 aa25.81■■□□□ 1.72
R3HCC1-208ENST00000522012 CHGBP05060 677 aa25.81■■□□□ 1.72
R3HCC1-208ENST00000522012 UPF2Q9HAU5 1272 aaKnown RBP25.81■■□□□ 1.72
R3HCC1-208ENST00000522012 LRP2BPQ9P2M1 347 aa25.81■■□□□ 1.72
R3HCC1-208ENST00000522012 ZSCAN25Q6NSZ9 544 aa25.8■■□□□ 1.72
R3HCC1-208ENST00000522012 PSMD1Q99460 953 aa25.8■■□□□ 1.72
R3HCC1-208ENST00000522012 A0A0D9SFI3 127 aa25.79■■□□□ 1.72
R3HCC1-208ENST00000522012 ZFYP08048 801 aaPredicted RBP25.79■■□□□ 1.72
R3HCC1-208ENST00000522012 MAP3K12Q12852 859 aa25.79■■□□□ 1.72
R3HCC1-208ENST00000522012 AOC3Q16853 763 aa25.79■■□□□ 1.72
R3HCC1-208ENST00000522012 SLFNL1Q499Z3 407 aa25.79■■□□□ 1.72
R3HCC1-208ENST00000522012 SLC9C2Q5TAH2 1124 aa25.79■■□□□ 1.72
R3HCC1-208ENST00000522012 SGSM2O43147 1006 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 WDR66Q8TBY9 1149 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 IL25Q9H293 177 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 PPIP5K2O43314 1243 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 REC8O95072 547 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 KIAA2012Q0VF49 1180 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 DBNDD1Q9H9R9 158 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 RAI14Q9P0K7 980 aa25.78■■□□□ 1.72
R3HCC1-208ENST00000522012 SYT17Q9BSW7 474 aa25.77■■□□□ 1.72
R3HCC1-208ENST00000522012 ZNF277Q9NRM2 450 aaPredicted RBP25.77■■□□□ 1.72
R3HCC1-208ENST00000522012 AKAP11Q9UKA4 1901 aa25.76■■□□□ 1.71
R3HCC1-208ENST00000522012 PDE6AP16499 860 aa25.76■■□□□ 1.71
R3HCC1-208ENST00000522012 ADD2P35612 726 aa25.76■■□□□ 1.71
R3HCC1-208ENST00000522012 ZMYM1Q5SVZ6 1142 aa25.76■■□□□ 1.71
R3HCC1-208ENST00000522012 FBXW7Q969H0 707 aa25.76■■□□□ 1.71
R3HCC1-208ENST00000522012 HELLSQ9NRZ9 838 aa25.76■■□□□ 1.71
R3HCC1-208ENST00000522012 GTF2IP78347 998 aa25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 MCMDC2Q4G0Z9 681 aa25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 ERICH6Q7L0X2 663 aa25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 PODNQ7Z5L7 613 aa25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 ZGPATQ8N5A5 531 aaKnown RBP25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 MAGEB6Q8N7X4 407 aa25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 SEC62Q99442 399 aaKnown RBP25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 ANO2Q9NQ90 1003 aa25.75■■□□□ 1.71
R3HCC1-208ENST00000522012 RAD50Q92878 1312 aa25.74■■□□□ 1.71
R3HCC1-208ENST00000522012 ECE2O60344 883 aa25.74■■□□□ 1.71
R3HCC1-208ENST00000522012 SPTY2D1Q68D10 685 aaPredicted RBP25.74■■□□□ 1.71
R3HCC1-208ENST00000522012 KIAA1211Q6ZU35 1233 aa25.74■■□□□ 1.71
R3HCC1-208ENST00000522012 ZNF532Q9HCE3 1301 aa25.74■■□□□ 1.71
R3HCC1-208ENST00000522012 SALL1Q9NSC2 1324 aa25.74■■□□□ 1.71
R3HCC1-208ENST00000522012 UBE3CQ15386 1083 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 APPBP2Q92624 585 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 TAOK3Q9H2K8 898 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 FAM205AQ6ZU69 1335 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 LARGE2Q8N3Y3 721 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 OSBP2Q969R2 916 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 VPS33BQ9H267 617 aa25.73■■□□□ 1.71
R3HCC1-208ENST00000522012 AK9Q5TCS8 1911 aa25.72■■□□□ 1.71
R3HCC1-208ENST00000522012 PRDX5P30044 214 aa25.72■■□□□ 1.71
R3HCC1-208ENST00000522012 TTLL5Q6EMB2 1281 aa25.72■■□□□ 1.71
R3HCC1-208ENST00000522012 CCDC129Q6ZRS4 1044 aa25.72■■□□□ 1.71
R3HCC1-208ENST00000522012 ZNF589Q86UQ0 364 aaPredicted RBP25.72■■□□□ 1.71
R3HCC1-208ENST00000522012 TCRBV5S4A2TA0A5A2 114 aa25.71■■□□□ 1.71
R3HCC1-208ENST00000522012 LDHBP07195 334 aaKnown RBP25.71■■□□□ 1.71
R3HCC1-208ENST00000522012 TBC1D22AQ8WUA7 517 aa25.71■■□□□ 1.71
R3HCC1-208ENST00000522012 USP26Q9BXU7 913 aa25.71■■□□□ 1.71
R3HCC1-208ENST00000522012 C22orf23Q9BZE7 217 aa25.71■■□□□ 1.71
R3HCC1-208ENST00000522012 M0R2C6 588 aa25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 NFKBIEO00221 500 aa25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 CYP7A1P22680 504 aa25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 IARSP41252 1262 aaKnown RBP25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 MFSD14BQ5SR56 506 aa25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 PUS7LQ9H0K6 701 aaKnown RBP25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 KCNQ5Q9NR82 932 aa25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 MAST3O60307 1309 aa25.7■■□□□ 1.7
R3HCC1-208ENST00000522012 MECOMQ03112 1051 aa25.69■■□□□ 1.7
R3HCC1-208ENST00000522012 NAA16Q6N069 864 aaPredicted RBP25.69■■□□□ 1.7
R3HCC1-208ENST00000522012 DZIP1Q86YF9 867 aaKnown RBP25.69■■□□□ 1.7
R3HCC1-208ENST00000522012 NSUN4Q96CB9 384 aaKnown RBP25.68■■□□□ 1.7
R3HCC1-208ENST00000522012 LSG1Q9H089 658 aaKnown RBP25.68■■□□□ 1.7
R3HCC1-208ENST00000522012 BRCA1P38398 1863 aaKnown RBP25.68■■□□□ 1.7
R3HCC1-208ENST00000522012 CCDC171Q6TFL3 1326 aa25.68■■□□□ 1.7
R3HCC1-208ENST00000522012 GRIK5Q16478 980 aa25.68■■□□□ 1.7
R3HCC1-208ENST00000522012 TBC1D32Q96NH3 1257 aa25.68■■□□□ 1.7
R3HCC1-208ENST00000522012 RBM19Q9Y4C8 960 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms