RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 ACAD11Q709F0 780 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 TP53INP1Q96A56 240 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 CCDC74AQ96AQ1 378 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 CSRNP1Q96S65 589 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 EHD4Q9H223 541 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 SEMA6BQ9H3T3 888 aa8.83□□□□□ -1
PTPN12-214ENST00000520947 SOX1O00570 391 aaPredicted RBP8.82□□□□□ -1
PTPN12-214ENST00000520947 ADAM11O75078 769 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 NLRP12P59046 1061 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 RSPO4Q2I0M5 234 aaPredicted RBP8.82□□□□□ -1
PTPN12-214ENST00000520947 SPRED3Q2MJR0 410 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 CCNJLQ8IV13 435 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
PTPN12-214ENST00000520947 ALKBH8Q96BT7 664 aaKnown RBP8.82□□□□□ -1
PTPN12-214ENST00000520947 MEGF10Q96KG7 1140 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 TCF12Q99081 682 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 DNAJC25Q9H1X3 360 aa8.82□□□□□ -1
PTPN12-214ENST00000520947 A0A096LPE4 126 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 A0A1W2PPZ6 126 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 GADD45BO75293 160 aaPredicted RBP8.81□□□□□ -1
PTPN12-214ENST00000520947 GRIA4P48058 902 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 ARL4DP49703 201 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 TRIM26Q12899 539 aaPredicted RBP8.81□□□□□ -1
PTPN12-214ENST00000520947 DUOXA2Q1HG44 320 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 KIAA0319Q5VV43 1072 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.81□□□□□ -1
PTPN12-214ENST00000520947 TMEM130Q8N3G9 435 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 UBASH3BQ8TF42 649 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 WNT8BQ93098 351 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 OSGEPQ9NPF4 335 aa8.81□□□□□ -1
PTPN12-214ENST00000520947 PATL2C9JE40 543 aaKnown RBP8.8□□□□□ -1
PTPN12-214ENST00000520947 GLB1P16278 677 aa8.8□□□□□ -1
PTPN12-214ENST00000520947 PLCB3Q01970 1234 aa8.8□□□□□ -1
PTPN12-214ENST00000520947 C19orf57Q0VDD7 668 aa8.8□□□□□ -1
PTPN12-214ENST00000520947 NKAPLQ5M9Q1 402 aa8.8□□□□□ -1
PTPN12-214ENST00000520947 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
PTPN12-214ENST00000520947 SSBP4Q9BWG4 385 aaPredicted RBP8.8□□□□□ -1
PTPN12-214ENST00000520947 ESRRAP11474 423 aaPredicted RBP8.79□□□□□ -1
PTPN12-214ENST00000520947 PNMA6FA0A0J9YX94 578 aa8.78□□□□□ -1
PTPN12-214ENST00000520947 TREHO43280 583 aa8.78□□□□□ -1
PTPN12-214ENST00000520947 DSC3Q14574 896 aa8.78□□□□□ -1
PTPN12-214ENST00000520947 PI16Q6UXB8 463 aa8.78□□□□□ -1
PTPN12-214ENST00000520947 KIAA1211Q6ZU35 1233 aa8.78□□□□□ -1
PTPN12-214ENST00000520947 DYRK3O43781 588 aa8.77□□□□□ -1.01
PTPN12-214ENST00000520947 MAPK8P45983 427 aa8.77□□□□□ -1.01
PTPN12-214ENST00000520947 GSTM4Q03013 218 aa8.77□□□□□ -1.01
PTPN12-214ENST00000520947 PCDH1Q08174 1060 aa8.77□□□□□ -1.01
PTPN12-214ENST00000520947 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
PTPN12-214ENST00000520947 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
PTPN12-214ENST00000520947 USP26Q9BXU7 913 aa8.76□□□□□ -1.01
PTPN12-214ENST00000520947 CLEC4MQ9H2X3 399 aaPredicted RBP8.76□□□□□ -1.01
PTPN12-214ENST00000520947 NLRP2Q9NX02 1062 aa8.76□□□□□ -1.01
PTPN12-214ENST00000520947 GRM2Q14416 872 aa8.75□□□□□ -1.01
PTPN12-214ENST00000520947 ZNF423Q2M1K9 1284 aa8.75□□□□□ -1.01
PTPN12-214ENST00000520947 ASB16Q96NS5 453 aa8.75□□□□□ -1.01
PTPN12-214ENST00000520947 UBL7Q96S82 380 aaPredicted RBP8.75□□□□□ -1.01
PTPN12-214ENST00000520947 ITGB7P26010 798 aa8.74□□□□□ -1.01
PTPN12-214ENST00000520947 ENOX2Q16206 610 aaKnown RBP8.74□□□□□ -1.01
PTPN12-214ENST00000520947 Q6ZS46 218 aa8.74□□□□□ -1.01
PTPN12-214ENST00000520947 Q8N3U1 123 aa8.74□□□□□ -1.01
PTPN12-214ENST00000520947 RUSC1Q9BVN2 902 aa8.74□□□□□ -1.01
PTPN12-214ENST00000520947 ZNF576Q9H609 170 aa8.74□□□□□ -1.01
PTPN12-214ENST00000520947 ABCB6Q9NP58 842 aa8.74□□□□□ -1.01
PTPN12-214ENST00000520947 TMEM238LA0A1B0GVL6 79 aa8.73□□□□□ -1.01
PTPN12-214ENST00000520947 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
PTPN12-214ENST00000520947 H2AFB2P0C5Z0 115 aa8.73□□□□□ -1.01
PTPN12-214ENST00000520947 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPN12-214ENST00000520947 SETDB2Q96T68 719 aa8.73□□□□□ -1.01
PTPN12-214ENST00000520947 SOX17Q9H6I2 414 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-214ENST00000520947 TRAK1Q9UPV9 953 aa8.73□□□□□ -1.01
PTPN12-214ENST00000520947 ITPKAP23677 461 aa8.72□□□□□ -1.01
PTPN12-214ENST00000520947 PRPF40BQ6NWY9 871 aaKnown RBP8.72□□□□□ -1.01
PTPN12-214ENST00000520947 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
PTPN12-214ENST00000520947 CEP41Q9BYV8 373 aa8.72□□□□□ -1.01
PTPN12-214ENST00000520947 RNF208Q9H0X6 261 aa8.72□□□□□ -1.01
PTPN12-214ENST00000520947 LOC100289279A0A1B0GTE1 492 aa8.71□□□□□ -1.02
PTPN12-214ENST00000520947 ZBTB7CA1YPR0 619 aa8.71□□□□□ -1.02
PTPN12-214ENST00000520947 ZNF157P51786 506 aaPredicted RBP8.71□□□□□ -1.02
PTPN12-214ENST00000520947 FCGRTP55899 365 aa8.71□□□□□ -1.02
PTPN12-214ENST00000520947 FMR1Q06787 632 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPN12-214ENST00000520947 PRSS36Q5K4E3 855 aa8.71□□□□□ -1.02
PTPN12-214ENST00000520947 SND1Q7KZF4 910 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPN12-214ENST00000520947 BCO2Q9BYV7 579 aa8.71□□□□□ -1.02
PTPN12-214ENST00000520947 WWC3Q9ULE0 1092 aa8.71□□□□□ -1.02
PTPN12-214ENST00000520947 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
PTPN12-214ENST00000520947 DLGAP3O95886 979 aa8.7□□□□□ -1.02
PTPN12-214ENST00000520947 FDX2Q6P4F2 183 aa8.7□□□□□ -1.02
PTPN12-214ENST00000520947 NXPE4Q6UWF7 544 aa8.7□□□□□ -1.02
PTPN12-214ENST00000520947 DTHD1Q6ZMT9 781 aa8.7□□□□□ -1.02
PTPN12-214ENST00000520947 PRR23CQ6ZRP0 262 aa8.7□□□□□ -1.02
PTPN12-214ENST00000520947 B3GALT4O96024 378 aa8.69□□□□□ -1.02
PTPN12-214ENST00000520947 MAOBP27338 520 aa8.69□□□□□ -1.02
PTPN12-214ENST00000520947 NUTM2GQ5VZR2 741 aa8.69□□□□□ -1.02
PTPN12-214ENST00000520947 ARMC10Q8N2F6 343 aa8.69□□□□□ -1.02
PTPN12-214ENST00000520947 UTP4Q969X6 686 aaKnown RBP8.69□□□□□ -1.02
PTPN12-214ENST00000520947 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
PTPN12-214ENST00000520947 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
PTPN12-214ENST00000520947 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
PTPN12-214ENST00000520947 PREPP48147 710 aa8.68□□□□□ -1.02
PTPN12-214ENST00000520947 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms