RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SUSD4Q5VX71 490 aa9.4□□□□□ -0.9
CTNNA1-216ENST00000519489 DIS3LQ8TF46 1054 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-216ENST00000519489 GMLQ99445 158 aa9.4□□□□□ -0.9
CTNNA1-216ENST00000519489 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
CTNNA1-216ENST00000519489 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.91
CTNNA1-216ENST00000519489 ALPK3Q96L96 1907 aa9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 ECE2O60344 883 aa9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 LRFN3Q9BTN0 628 aa9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 TEX13AQ9BXU3 409 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 SEMA6BQ9H3T3 888 aa9.39□□□□□ -0.91
CTNNA1-216ENST00000519489 NTSR2O95665 410 aa9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 MTHFSDQ2M296 383 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 TTC5Q8N0Z6 440 aa9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 SLC10A4Q96EP9 437 aa9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 PAWRQ96IZ0 340 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 UBE2OQ9C0C9 1292 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 RNF208Q9H0X6 261 aa9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 POLLQ9UGP5 575 aa9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-216ENST00000519489 SGPL1O95470 568 aa9.37□□□□□ -0.91
CTNNA1-216ENST00000519489 ZBTB48P10074 688 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-216ENST00000519489 GPTP24298 496 aa9.37□□□□□ -0.91
CTNNA1-216ENST00000519489 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
CTNNA1-216ENST00000519489 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
CTNNA1-216ENST00000519489 MYOZ2Q9NPC6 264 aa9.37□□□□□ -0.91
CTNNA1-216ENST00000519489 MRE11P49959 708 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 ARMC9Q7Z3E5 817 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 PLPP6Q8IY26 295 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 ADAMTS19Q8TE59 1207 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 BRI3BPQ8WY22 251 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 NECAB3Q96P71 396 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 COL4A1P02462 1669 aa9.36□□□□□ -0.91
CTNNA1-216ENST00000519489 SCN9AQ15858 1988 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 BBOX1O75936 387 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 GRK4P32298 578 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 PBX2P40425 430 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 LACTBP83111 547 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 FAM43AQ8N2R8 423 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 TRIM47Q96LD4 638 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 P2RX7Q99572 595 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 NYXQ9GZU5 481 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 EPHX3Q9H6B9 360 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 RIPOR2Q9Y4F9 1068 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
CTNNA1-216ENST00000519489 ZFHX4Q86UP3 3567 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 IL13P35225 146 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 DSG2Q14126 1118 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 FMNL2Q96PY5 1086 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 C11orf16Q9NQ32 467 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 SRRDQ9UH36 339 aa9.34□□□□□ -0.91
CTNNA1-216ENST00000519489 WNT10BO00744 389 aa9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 GPSM2P81274 684 aa9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 TAF1CQ15572 869 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 SLC10A5Q5PT55 438 aa9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 TTLL7Q6ZT98 887 aa9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 ZNF34Q8IZ26 560 aa9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 UHRF1Q96T88 793 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 MXD3Q9BW11 206 aa9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-216ENST00000519489 XIRP2A4UGR9 3374 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 TAF1P21675 1872 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 USP17L8P0C7I0 530 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 FOSL2P15408 326 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 OSBPP22059 807 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 AGBL3Q8NEM8 1001 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 DEFB118Q96PH6 123 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 C1QTNF1Q9BXJ1 281 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 HCN4Q9Y3Q4 1203 aa9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 IBTKQ9P2D0 1353 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-216ENST00000519489 SASH1O94885 1247 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 TFRCP02786 760 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 NF2P35240 595 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 GRAPQ13588 217 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 ARHGEF6Q15052 776 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 OTUD7BQ6GQQ9 843 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 GRAPLQ8TC17 118 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 ASB2Q96Q27 587 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 TMX4Q9H1E5 349 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 ZFYVE28Q9HCC9 887 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 LAMB1P07942 1786 aa9.31□□□□□ -0.92
CTNNA1-216ENST00000519489 TLR2O60603 784 aa9.3□□□□□ -0.92
CTNNA1-216ENST00000519489 HCLS1P14317 486 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-216ENST00000519489 NGEFQ8N5V2 710 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms