RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 XAGE2Q96GT9 111 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 GBP3Q9H0R5 595 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 MAP2P11137 1827 aaKnown RBP15.56■□□□□ 0.08
PABPC1-208ENST00000519004 TMEM232C9JQI7 657 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 SLC27A2O14975 620 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 RPS6KB1P23443 525 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 FNTAP49354 379 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 UBASH3AP57075 661 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 KARSQ15046 597 aaKnown RBP15.56■□□□□ 0.08
PABPC1-208ENST00000519004 PTPN21Q16825 1174 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 FAM43BQ6ZT52 329 aaPredicted RBP15.56■□□□□ 0.08
PABPC1-208ENST00000519004 RHPN1Q8TCX5 695 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 SDF4Q9BRK5 362 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 CDC23Q9UJX2 597 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 EMILIN1Q9Y6C2 1016 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 RHOXF2BP0C7M4 288 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 HSP90B1P14625 803 aaKnown RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 PAX7P23759 505 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 CALRP27797 417 aaKnown RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 NLRP12P59046 1061 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 RPGRIP1LQ68CZ1 1315 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 NAIF1Q69YI7 327 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 BLOC1S2Q6QNY1 142 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 N4BP2L2Q92802 583 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 BAG1Q99933 345 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 RHOXF2Q9BQY4 288 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 IRX2Q9BZI1 471 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 CD248Q9HCU0 757 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 ATP7BP35670 1465 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 IKBKBO14920 756 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 TOP1P11387 765 aaKnown RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 PREPLQ4J6C6 727 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-208ENST00000519004 IGSF22Q8N9C0 903 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 SSH3Q8TE77 659 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 VIPAS39Q9H9C1 493 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 VEZTQ9HBM0 779 aa15.55■□□□□ 0.08
PABPC1-208ENST00000519004 ZC3H4Q9UPT8 1303 aaKnown RBP15.54■□□□□ 0.08
PABPC1-208ENST00000519004 KLHL33A6NCF5 533 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 BIN1O00499 593 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 CBFA2T2O43439 604 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 NEBLO76041 1014 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 GCFC2P16383 781 aaKnown RBP15.54■□□□□ 0.08
PABPC1-208ENST00000519004 CTCFLQ8NI51 663 aaPredicted RBP15.54■□□□□ 0.08
PABPC1-208ENST00000519004 MRPS27Q92552 414 aaKnown RBP15.54■□□□□ 0.08
PABPC1-208ENST00000519004 KAT14Q9H8E8 782 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 MRPL44Q9H9J2 332 aaKnown RBP15.54■□□□□ 0.08
PABPC1-208ENST00000519004 SLC24A3Q9HC58 644 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 TAF6LQ9Y6J9 622 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 ARHGEF10O15013 1369 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 USP42Q9H9J4 1324 aaKnown RBP15.54■□□□□ 0.08
PABPC1-208ENST00000519004 MYO1FO00160 1098 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 TEX11Q8IYF3 940 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 CAPN7Q9Y6W3 813 aa15.54■□□□□ 0.08
PABPC1-208ENST00000519004 KIF3BO15066 747 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 ME1P48163 572 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 HDGFL2Q7Z4V5 671 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-208ENST00000519004 MAP4K1Q92918 833 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 XRN1Q8IZH2 1706 aaKnown RBP15.53■□□□□ 0.08
PABPC1-208ENST00000519004 A0A1B0GVL5 298 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 CHUKO15111 745 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 STX10O60499 249 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 IRAK1P51617 712 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 NDUFA8P51970 172 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 TBX2Q13207 712 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-208ENST00000519004 CFAP100Q494V2 611 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 TTC19Q6DKK2 380 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-208ENST00000519004 SMARCC1Q92922 1105 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-208ENST00000519004 DESI2Q9BSY9 194 aa15.53■□□□□ 0.08
PABPC1-208ENST00000519004 NPHP4O75161 1426 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-208ENST00000519004 MAP3K5Q99683 1374 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 SURF6O75683 361 aaKnown RBP15.52■□□□□ 0.08
PABPC1-208ENST00000519004 SERPINC1P01008 464 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 ERCC3P19447 782 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 TUBB4BP68371 445 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 MCM10Q7L590 875 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 AMOTL1Q8IY63 956 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 INTS13Q9NVM9 706 aa15.52■□□□□ 0.08
PABPC1-208ENST00000519004 CLTCQ00610 1675 aaKnown RBP15.52■□□□□ 0.07
PABPC1-208ENST00000519004 TFRCP02786 760 aaKnown RBP15.52■□□□□ 0.07
PABPC1-208ENST00000519004 IRX1P78414 480 aaPredicted RBP15.52■□□□□ 0.07
PABPC1-208ENST00000519004 AFAP1Q8N556 730 aa15.52■□□□□ 0.07
PABPC1-208ENST00000519004 EHD4Q9H223 541 aa15.52■□□□□ 0.07
PABPC1-208ENST00000519004 PCDHA7Q9UN72 937 aa15.52■□□□□ 0.07
PABPC1-208ENST00000519004 NF2P35240 595 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 SEMA3FQ13275 785 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 TC2NQ8N9U0 490 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 RIN2Q8WYP3 895 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-208ENST00000519004 HPCAL4Q9UM19 191 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 ATXN2Q99700 1313 aaKnown RBP15.51■□□□□ 0.07
PABPC1-208ENST00000519004 H0YHG0 523 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 GLRX3O76003 335 aaKnown RBP15.51■□□□□ 0.07
PABPC1-208ENST00000519004 FSBPO95073 299 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 SARNPP82979 210 aaKnown RBP15.51■□□□□ 0.07
PABPC1-208ENST00000519004 MTX1Q13505 466 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 POLA2Q14181 598 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
PABPC1-208ENST00000519004 WDR93Q6P2C0 686 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms