RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
CTNNA1-207ENST00000518263 GMPR2Q9P2T1 348 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-207ENST00000518263 SUPT16HQ9Y5B9 1047 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-207ENST00000518263 PPFIA3O75145 1194 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 CRKP46108 304 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 SOX9P48436 509 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 ZNF157P51786 506 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 LAPTM4AQ15012 233 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 SNAP47Q5SQN1 464 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 ZNF468Q5VIY5 522 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 VWA5B2Q8N398 1253 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 GOLM1Q8NBJ4 401 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 UBE2OQ9C0C9 1292 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 ZSWIM4Q9H7M6 989 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 ZNF408Q9H9D4 720 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 PRR12Q9ULL5 1215 aa6.22□□□□□ -1.41
CTNNA1-207ENST00000518263 CDC14CA4D256 554 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 SIN3BO75182 1162 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 GHRHP01286 108 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 SSBP05455 408 aaKnown RBP eCLIP6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 EIF2AK2P19525 551 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 CANXP27824 592 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 RPS26P62854 115 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 TBC1D8BQ0IIM8 1120 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 PCNX4Q63HM2 1172 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 CEP135Q66GS9 1140 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 BSNDQ8WZ55 320 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 TRERF1Q96PN7 1200 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 OSBPL2Q9H1P3 480 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 TMEM39AQ9NV64 488 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 KLF15Q9UIH9 416 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 PCDHB5Q9Y5E4 795 aa6.21□□□□□ -1.42
CTNNA1-207ENST00000518263 CPB1P15086 417 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 BMP6P22004 513 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 ETFBP38117 255 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 PCBP4P57723 403 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 APOBRQ0VD83 1088 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 NFX1Q12986 1120 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 SERINC3Q13530 473 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 COL9A2Q14055 689 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 PCSK7Q16549 785 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 BNC2Q6ZN30 1099 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 FAM196AQ6ZSG2 479 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 VN1R5Q7Z5H4 357 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 SLITRK4Q8IW52 837 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 TNFRSF25Q93038 417 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 CLEC4MQ9H2X3 399 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 NAGPAQ9UK23 515 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 SLC6A14Q9UN76 642 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 SOX13Q9UN79 622 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 MRVI1Q9Y6F6 885 aa6.2□□□□□ -1.42
CTNNA1-207ENST00000518263 TLDC2A0PJX2 215 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 SMNDC1O75940 238 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 B3GALT4O96024 378 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 F13A1P00488 732 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 BMP4P12644 408 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 PCDH1Q08174 1060 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 PERM1Q5SV97 790 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 FOXR1Q6PIV2 292 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 SV2AQ7L0J3 742 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 FAM35AQ86V20 835 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 CKAP2LQ8IYA6 745 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 FBXO27Q8NI29 283 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 STK35Q8TDR2 534 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 NANOS1Q8WY41 292 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 NKD1Q969G9 470 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 PLD4Q96BZ4 506 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 MDFIQ99750 246 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 ADAM19Q9H013 955 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 RBSNQ9H1K0 784 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 TBX22Q9Y458 520 aa6.19□□□□□ -1.42
CTNNA1-207ENST00000518263 FAM221AA4D161 298 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 NME2P22392 152 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 SEZ6Q53EL9 994 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 NBPF6Q5VWK0 638 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 CCDC84Q86UT8 332 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 NBPF4Q96M43 638 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 LPIN3Q9BQK8 851 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 SMG9Q9H0W8 520 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 AVENQ9NQS1 362 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 TRIM33Q9UPN9 1127 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
CTNNA1-207ENST00000518263 ADARB2-AS1A8MUL3 147 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 TLR3O15455 904 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 KLF4O43474 513 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 HSP90B1P14625 803 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 PTPRAP18433 802 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 ADH7P40394 386 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 SEPT6Q14141 434 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 GAS6Q14393 721 aa6.17□□□□□ -1.42
CTNNA1-207ENST00000518263 ZNF746Q6NUN9 644 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms